RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CEP170P1Q96L14 293 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 HEMGNQ9BXL5 484 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 SERPINB13Q9UIV8 391 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 IVNS1ABPQ9Y6Y0 642 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 ZNF189O75820 626 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 GYPCP04921 128 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 KRT7P08729 469 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 UBE2SQ16763 222 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 ANKRD40Q6AI12 368 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 FAM20AQ96MK3 541 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 FIS1Q9Y3D6 152 aa15.92■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC16A3O15427 465 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 RHOBTB3O94955 611 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 GPS1Q13098 491 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 TNFAIP1Q13829 316 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 MIS18BP1Q6P0N0 1132 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 MYCBPAPQ8TBZ2 947 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 CDHR2Q9BYE9 1310 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ESRRBO95718 433 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SERPINB10P48595 397 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 CNGA3Q16281 694 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SYDE2Q5VT97 1194 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SUGP1Q8IWZ8 645 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 DONSONQ9NYP3 566 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 MTO1Q9Y2Z2 717 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.145e-7■■□□□ 13
SMARCA4-207ENST00000541122 GRM4Q14833 912 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 POTEAQ6S8J7 498 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 KCTD1Q719H9 257 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 TRAPPC11Q7Z392 1133 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ENAHQ8N8S7 591 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SCG3Q8WXD2 468 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ERP27Q96DN0 273 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 KCNK16Q96T55 309 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 PNKPQ96T60 521 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ZBTB18Q99592 522 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SUGCTQ9HAC7 445 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ASNSD1Q9NWL6 643 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 EIF4E1BA6NMX2 242 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 IGF2BP3O00425 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 KDM1AO60341 852 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 BMP3P12645 472 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 PRLRP16471 622 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 SEC24CP53992 1094 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 KPNB1Q14974 876 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 KIF19Q2TAC6 998 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 COL23A1Q86Y22 540 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 PPM1NQ8N819 430 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 USP38Q8NB14 1042 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 THAP11Q96EK4 314 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ZWILCHQ9H900 591 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 ADCY10Q96PN6 1610 aa15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 PDS5AQ29RF7 1337 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-207ENST00000541122 MAGEA13PA6NCF6 341 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC26A4O43511 780 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 KRT4P19013 534 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 PAMP19021 973 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 EFTUD2Q15029 972 aaKnown RBP eCLIP15.9■□□□□ 0.144e-7■■■■□ 22
SMARCA4-207ENST00000541122 SYN2Q92777 582 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 CD248Q9HCU0 757 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 RAD51CO43502 376 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 DNAJC6O75061 913 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 FAM149B1Q96BN6 582 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 PRDM4Q9UKN5 801 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 hCG_2014768A0A024R1R8 64 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 POTEMA6NI47 508 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 DEAF1O75398 565 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 MS4A14Q96JA4 679 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 FUCA2Q9BTY2 467 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 IL1RAPL1Q9NZN1 696 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 PALM3A6NDB9 673 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 KITP10721 976 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 TAP1Q03518 808 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 NAB2Q15742 525 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 TSSK1BQ9BXA7 367 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 DHX36Q9H2U1 1008 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
SMARCA4-207ENST00000541122 CARSP49589 748 aaKnown RBP15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 GLYCTKQ8IVS8 523 aa15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 C7orf25Q9BPX7 421 aa15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 KDM4CQ9H3R0 1056 aa15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 CCDC134Q9H6E4 229 aa15.89■□□□□ 0.14
SMARCA4-207ENST00000541122 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 NEO1Q92859 1461 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 RTN2O75298 545 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 APOA1P02647 267 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 SERPINB2P05120 415 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
SMARCA4-207ENST00000541122 STX18Q9P2W9 335 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms