RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 OTOP3Q7RTS5 596 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 GPR149Q86SP6 731 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 AUTS2Q8WXX7 1259 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 FDXACB1Q9BRP7 624 aaPredicted RBP30.14■■■□□ 2.42
CHFR-218ENST00000540963 C22orf23Q9BZE7 217 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 SH3GLB2Q9NR46 395 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 SEPT9Q9UHD8 586 aaPredicted RBP30.14■■■□□ 2.42
CHFR-218ENST00000540963 CHMP2AO43633 222 aa30.13■■■□□ 2.41
CHFR-218ENST00000540963 RNASELQ05823 741 aaKnown RBP30.13■■■□□ 2.41
CHFR-218ENST00000540963 MTERF2Q49AM1 385 aa30.13■■■□□ 2.41
CHFR-218ENST00000540963 PGBD4Q96DM1 585 aa30.13■■■□□ 2.41
CHFR-218ENST00000540963 JPH2Q9BR39 696 aaPredicted RBP30.13■■■□□ 2.41
CHFR-218ENST00000540963 PIN4Q9Y237 131 aaKnown RBP30.13■■■□□ 2.41
CHFR-218ENST00000540963 OFD1O75665 1012 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 STBD1O95210 358 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 PTPN14Q15678 1187 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 Q4G0T1 1027 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 B3GNT9Q6UX72 402 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 C15orf39Q6ZRI6 1047 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 Q6ZUG5 572 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 CCDC149Q6ZUS6 474 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 MIER3Q7Z3K6 550 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 BRF1Q92994 677 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 EMILIN2Q9BXX0 1053 aa30.12■■■□□ 2.41
CHFR-218ENST00000540963 MAFO75444 373 aaPredicted RBP30.11■■■□□ 2.41
CHFR-218ENST00000540963 NTRK3Q16288 839 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 KANK3Q6NY19 840 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 TMC5Q6UXY8 1006 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 BCL7CQ8WUZ0 217 aaPredicted RBP30.11■■■□□ 2.41
CHFR-218ENST00000540963 KCNB2Q92953 911 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 LPPQ93052 612 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 PHKBQ93100 1093 aa30.11■■■□□ 2.41
CHFR-218ENST00000540963 NKD2Q969F2 451 aaPredicted RBP30.11■■■□□ 2.41
CHFR-218ENST00000540963 SUCLA2Q9P2R7 463 aaPredicted RBP30.11■■■□□ 2.41
CHFR-218ENST00000540963 C2orf16Q68DN1 1984 aa30.1■■■□□ 2.41
CHFR-218ENST00000540963 IFNAR1P17181 557 aa30.1■■■□□ 2.41
CHFR-218ENST00000540963 TDGQ13569 410 aa30.1■■■□□ 2.41
CHFR-218ENST00000540963 AGXT2Q9BYV1 514 aa30.1■■■□□ 2.41
CHFR-218ENST00000540963 CYP3A7-CYP3A51PA0A087WV96 503 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 AOC1P19801 751 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 CYP3A7P24462 503 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 SLC11A1P49279 550 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 CLCN4P51793 760 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 CWF19L1Q69YN2 538 aaKnown RBP30.09■■■□□ 2.41
CHFR-218ENST00000540963 CATSPER4Q7RTX7 472 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 RHPN2Q8IUC4 686 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 URGCPQ8TCY9 931 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 KANSL3Q9P2N6 904 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 DUSP12Q9UNI6 340 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 INPP5FQ9Y2H2 1132 aa30.09■■■□□ 2.41
CHFR-218ENST00000540963 DMDP11532 3685 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 TBCKQ8TEA7 893 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 KLHL5Q96PQ7 755 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 RTP3Q9BQQ7 232 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 TMEM175Q9BSA9 504 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 VN1R3Q9BXE9 311 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 AGPAT5Q9NUQ2 364 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 VPS54Q9P1Q0 977 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 IGSF9Q9P2J2 1179 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 DNAJB4Q9UDY4 337 aa30.08■■■□□ 2.41
CHFR-218ENST00000540963 CNTNAP2Q9UHC6 1331 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 KLRC2P26717 231 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 BLOC1S2Q6QNY1 142 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 MOXD1Q6UVY6 613 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 CYP26C1Q6V0L0 522 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 MRPL10Q7Z7H8 261 aaKnown RBP30.07■■■□□ 2.4
CHFR-218ENST00000540963 CMASQ8NFW8 434 aaPredicted RBP30.07■■■□□ 2.4
CHFR-218ENST00000540963 SLC26A6Q9BXS9 759 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 RHOBTB2Q9BYZ6 727 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 PCDHB2Q9Y5E7 798 aa30.07■■■□□ 2.4
CHFR-218ENST00000540963 SPDYE4A6NLX3 237 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 MEIS3P2A8K0S8 358 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 LILRB3O75022 631 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 ALDH2P05091 517 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 NLRP5P59047 1200 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 LETM2Q2VYF4 491 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 FRMD5Q7Z6J6 570 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 EXOC8Q8IYI6 725 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 CCDC105Q8IYK2 499 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 FLCNQ8NFG4 579 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 IFT122Q9HBG6 1241 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 MRPL17Q9NRX2 175 aaKnown RBP30.06■■■□□ 2.4
CHFR-218ENST00000540963 SSX2IPQ9Y2D8 614 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 PPME1Q9Y570 386 aa30.06■■■□□ 2.4
CHFR-218ENST00000540963 CDC45O75419 566 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 CNPP09543 421 aaKnown RBP30.05■■■□□ 2.4
CHFR-218ENST00000540963 CPA1P15085 419 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 NPR3P17342 541 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 PSMC5P62195 406 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 LONRF3Q496Y0 759 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 ERMP1Q7Z2K6 904 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 ZNF280BQ86YH2 543 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 FAM177A1Q8N128 213 aaPredicted RBP30.05■■■□□ 2.4
CHFR-218ENST00000540963 GJA10Q969M2 543 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 NLRP4Q96MN2 994 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 JAKMIP1Q96N16 626 aaKnown RBP30.05■■■□□ 2.4
CHFR-218ENST00000540963 MBOAT7Q96N66 472 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 GBP3Q9H0R5 595 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 KCNK12Q9HB15 430 aa30.05■■■□□ 2.4
CHFR-218ENST00000540963 DPP7Q9UHL4 492 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms