RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 DDX41Q9UJV9 622 aaKnown RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 STX8Q9UNK0 236 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 WDR19Q8NEZ3 1342 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SIP14410 1827 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 GREB1LQ9C091 1923 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 PKD1L2Q7Z442 2459 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 C17orf102A2RUQ5 167 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 GPR182O15218 404 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 GPAA1O43292 621 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 RAB11FIP3O75154 756 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 EIF3JO75822 258 aaKnown RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 GLP2RO95838 553 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 APPP05067 770 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ITGB1P05556 798 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ZFYP08048 801 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ZNF286BP0CG31 522 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 EPXP11678 715 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 DNAJB1P25685 340 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 HOXC8P31273 242 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ADH7P40394 386 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 CLCN5P51795 746 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 BTG3Q14201 252 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 CCDC96Q2M329 555 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 TTBK2Q6IQ55 1244 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 TMC7Q7Z402 723 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ADGRD2Q7Z7M1 963 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 FTSJ3Q8IY81 847 aaKnown RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 IFNL3Q8IZI9 196 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 C1orf127Q8N9H9 656 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 KREMEN2Q8NCW0 462 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 NSUN6Q8TEA1 469 aaKnown RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ATP8B4Q8TF62 1192 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 APPBP2Q92624 585 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 TNFRSF25Q93038 417 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ATP6V0A1Q93050 837 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 CDCA3Q99618 268 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 MDFIQ99750 246 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 SEMA4AQ9H3S1 761 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 TLE6Q9H808 572 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 AVENQ9NQS1 362 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 IL17RBQ9NRM6 502 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ABI2Q9NYB9 513 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 KANSL3Q9P2N6 904 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 DCTN4Q9UJW0 460 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 GDF2Q9UK05 429 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 MKL2Q9ULH7 1088 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 BARX2Q9UMQ3 279 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 SORCS3Q9UPU3 1222 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 PTPRSQ13332 1948 aa5.38□□□□□ -1.55
SNHG1-214ENST00000540865 ANKRD11Q6UB99 2663 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-214ENST00000540865 SPTBN2O15020 2390 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 BAHCC1Q9P281 2608 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ELOA3CA0A087WX78 387 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TSPY2A6NKD2 308 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ELOA3DA6NLF2 546 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 RBAK-RBAKDNI3L0D1 243 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 J3QW42 95 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ENPP3O14638 875 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 RNF113AO15541 343 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TREHO43280 583 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TNFRSF21O75509 655 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 DGKIO75912 1065 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 CSPG5O95196 566 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 MAP3K6O95382 1288 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 LMNAP02545 664 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 CTSHP09668 335 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 SRGAP2BP0DMP2 458 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 GNAT1P11488 350 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 CPB1P15086 417 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 UBE3AQ05086 875 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 PPARAQ07869 468 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ORC1Q13415 861 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ELOA3BQ3SY89 546 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TTC39BQ5VTQ0 682 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 PDE12Q6L8Q7 609 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 KCNV1Q6PIU1 500 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 XKR5Q6UX68 686 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TMEM184AQ6ZMB5 413 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 C8orf86Q6ZUL3 223 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 RASGRP2Q7LDG7 609 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 RBM23Q86U06 439 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 MCF2L2Q86YR7 1114 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 KBTBD3Q8NAB2 608 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 KLHL23Q8NBE8 558 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ELOA3Q8NG57 546 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 SYTL5Q8TDW5 730 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 POF1BQ8WVV4 589 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 NEK1Q96PY6 1258 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 TAAR1Q96RJ0 339 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 FAM129BQ96TA1 746 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 C16orf70Q9BSU1 422 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 OSBPL7Q9BZF2 842 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 NIF3L1Q9GZT8 377 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 S1PR5Q9H228 398 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 CHRDQ9H2X0 955 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 DLL3Q9NYJ7 618 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 NAGPAQ9UK23 515 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms