RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SPP2Q13103 211 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 COG2Q14746 738 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 BRD3Q15059 726 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 ASTE1Q2TB18 679 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 ODR4Q5SWX8 454 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 GBP6Q6ZN66 633 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 CTAGE6Q86UF2 777 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 CTAGE4Q8IX94 777 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 CPXCR1Q8N123 301 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 SMCR8Q8TEV9 937 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 VTI1AQ96AJ9 217 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 DRC1Q96MC2 740 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 RMDN3Q96TC7 470 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 PDCD2LQ9BRP1 358 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 ST6GALNAC4Q9H4F1 302 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 PXMP2Q9NR77 195 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 ANKEF1Q9NU02 776 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 GPRC5DQ9NZD1 345 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 TMOD4Q9NZQ9 345 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMO3-224ENST00000540848 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 FRMD4BQ9Y2L6 1034 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
LMO3-224ENST00000540848 V9GYY5 206 aaPredicted RBP11.1□□□□□ -0.63
LMO3-224ENST00000540848 EPHB6O15197 1021 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 MAPK13O15264 365 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 GFPT2O94808 682 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 NOL4O94818 638 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 ZIC2O95409 532 aaPredicted RBP11.09□□□□□ -0.63
LMO3-224ENST00000540848 SCP2P22307 547 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 MCM3P25205 808 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 POLR2FP61218 127 aaKnown RBP11.09□□□□□ -0.63
LMO3-224ENST00000540848 PSMC5P62195 406 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
LMO3-224ENST00000540848 RASSF7Q02833 373 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 C12orf56Q8IXR9 622 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 REPS2Q8NFH8 660 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
LMO3-224ENST00000540848 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 STRA6Q9BX79 667 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 GANQ9H2C0 597 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 KCNG1Q9UIX4 513 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 ZMYM2Q9UBW7 1377 aa11.09□□□□□ -0.63
LMO3-224ENST00000540848 NFASCO94856 1347 aa11.08□□□□□ -0.63
LMO3-224ENST00000540848 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.63
LMO3-224ENST00000540848 RLFQ13129 1914 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 CCDC151A5D8V7 595 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
LMO3-224ENST00000540848 TGFB1I1O43294 461 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 AKAP3O75969 853 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 LMNB1P20700 586 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 MAGEA1P43355 309 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 ITGB3BPQ13352 177 aaPredicted RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 ASIC2Q16515 512 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 TDRD12Q587J7 1177 aaKnown RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 MUM1L1Q5H9M0 696 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 TEX35Q5T0J7 233 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 FAM186BQ8IYM0 893 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 NSUN6Q8TEA1 469 aaKnown RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 SLC35C1Q96A29 364 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 BORCS6Q96GS4 357 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 TEX13BQ9BXU2 312 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 C17orf75Q9HAS0 396 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
LMO3-224ENST00000540848 ZHX2Q9Y6X8 837 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
LMO3-224ENST00000540848 A0A0U1RQJ8 604 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 SOBPA7XYQ1 873 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 BTNL10A8MVZ5 291 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 P4HA2O15460 535 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 HIP1RO75146 1068 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 ERLIN1O75477 346 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 CCDC172P0C7W6 258 aa11.07□□□□□ -0.64
LMO3-224ENST00000540848 PLS3P13797 630 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms