RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ZNF623O75123 536 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 DGAT1O75907 488 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 ATP2B1P20020 1258 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 NRIP1P48552 1158 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 GJD3Q8N144 294 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 FAM184AQ8NB25 1140 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 MICAL1Q8TDZ2 1067 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 CD320Q9NPF0 282 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 PRKAG3Q9UGI9 489 aa23.37■■□□□ 1.33
CHFR-217ENST00000540537 PUF60Q9UHX1 559 aaKnown RBP23.37■■□□□ 1.33
CHFR-217ENST00000540537 FSD2A1L4K1 749 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 POTEMA6NI47 508 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 NDUFV1P49821 464 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 ERVFC1P60507 584 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 MXD4Q14582 209 aaPredicted RBP23.36■■□□□ 1.33
CHFR-217ENST00000540537 RABEP1Q15276 862 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 RNF149Q8NC42 400 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 CCDC43Q96MW1 224 aaKnown RBP23.36■■□□□ 1.33
CHFR-217ENST00000540537 CDCA3Q99618 268 aaPredicted RBP23.36■■□□□ 1.33
CHFR-217ENST00000540537 C1QTNF1Q9BXJ1 281 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 MINDY3Q9H8M7 445 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 SPG21Q9NZD8 308 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 CD207Q9UJ71 328 aa23.36■■□□□ 1.33
CHFR-217ENST00000540537 XRCC6P12956 609 aaKnown RBP eCLIP23.35■■□□□ 1.336e-7■■■■■ 28.8
CHFR-217ENST00000540537 RARRES1P49788 294 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 KRT17Q04695 432 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 POU5F1BQ06416 359 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 SMAD4Q13485 552 aaKnown RBP23.35■■□□□ 1.33
CHFR-217ENST00000540537 PCBP1Q15365 356 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHFR-217ENST00000540537 CLUL1Q15846 466 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 RBM23Q86U06 439 aaKnown RBP23.35■■□□□ 1.33
CHFR-217ENST00000540537 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 PGBD4Q96DM1 585 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 MSLNLQ96KJ4 702 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 TLE6Q9H808 572 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 TUFT1Q9NNX1 390 aa23.35■■□□□ 1.33
CHFR-217ENST00000540537 CARNS1A5YM72 827 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 MBTPS2O43462 519 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 OR52Z1P0C646 297 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 HOXA11P31270 313 aaPredicted RBP23.34■■□□□ 1.33
CHFR-217ENST00000540537 PBX3P40426 434 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 TRAPPC10P48553 1259 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 GNL2Q13823 731 aaKnown RBP23.34■■□□□ 1.33
CHFR-217ENST00000540537 TFDP1Q14186 410 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 SMAD2Q15796 467 aaKnown RBP23.34■■□□□ 1.33
CHFR-217ENST00000540537 GLB1LQ6UWU2 654 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 IFNLR1Q8IU57 520 aaPredicted RBP23.34■■□□□ 1.33
CHFR-217ENST00000540537 SLC39A11Q8N1S5 342 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 LPPQ93052 612 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 NGRNQ9NPE2 291 aaKnown RBP23.34■■□□□ 1.33
CHFR-217ENST00000540537 PCDHB2Q9Y5E7 798 aa23.34■■□□□ 1.33
CHFR-217ENST00000540537 GLP2RO95838 553 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 SPATA31C1P0DKV0 1188 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 SSTR3P32745 418 aaPredicted RBP23.33■■□□□ 1.33
CHFR-217ENST00000540537 PTENP60484 403 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 ZNF174Q15697 407 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 DUSP6Q16828 381 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 TTC38Q5R3I4 469 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 PIGOQ8TEQ8 1089 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 TCF25Q9BQ70 676 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 POLR3CQ9BUI4 534 aaPredicted RBP23.33■■□□□ 1.33
CHFR-217ENST00000540537 ENTPD7Q9NQZ7 604 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 CLEC1BQ9P126 229 aa23.33■■□□□ 1.33
CHFR-217ENST00000540537 ST18O60284 1047 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 OFD1O75665 1012 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ERLIN2O94905 339 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 EYA4O95677 639 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 AXLP30530 894 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ARL2P36404 184 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ALDH7A1P49419 539 aaKnown RBP23.32■■□□□ 1.32
CHFR-217ENST00000540537 BCAR1P56945 870 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ZP2Q05996 745 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 COASYQ13057 564 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 LONRF3Q496Y0 759 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 NOMO2Q5JPE7 1267 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 PLPP4Q5VZY2 271 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 MRPL10Q7Z7H8 261 aaKnown RBP23.32■■□□□ 1.32
CHFR-217ENST00000540537 CATSPER3Q86XQ3 398 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ADHFE1Q8IWW8 467 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ERMNQ8TAM6 284 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 ASAP3Q8TDY4 903 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 KHSRPQ92945 711 aaKnown RBP eCLIP23.32■■□□□ 1.32
CHFR-217ENST00000540537 EPHX3Q9H6B9 360 aa23.32■■□□□ 1.32
CHFR-217ENST00000540537 NOL7Q9UMY1 257 aaKnown RBP23.32■■□□□ 1.32
CHFR-217ENST00000540537 MEIS3P2A8K0S8 358 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 PER2O15055 1255 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 U2AF2P26368 475 aaKnown RBP eCLIP23.31■■□□□ 1.32
CHFR-217ENST00000540537 TECP42680 631 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 CAPSQ13938 189 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 UBXN11Q5T124 520 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 SMRP1Q8NCR6 262 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 CCDC51Q96ER9 411 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 NFKBIZQ9BYH8 718 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 TBC1D13Q9NVG8 400 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 DBR1Q9UK59 544 aaKnown RBP23.31■■□□□ 1.32
CHFR-217ENST00000540537 C5orf42Q9H799 3197 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 CNTNAP2Q9UHC6 1331 aa23.31■■□□□ 1.32
CHFR-217ENST00000540537 C19orf67A6NJJ6 358 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 PI4K2BG5E9Z4 385 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 TSPAN1O60635 241 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms