RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 IGSF9BQ9UPX0 1349 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 GOLGA8AA7E2F4 631 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 GOLGA8BA8MQT2 603 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 FOXD2O60548 495 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 EIF5BO60841 1220 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CXCL14O95715 111 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CFBP00751 764 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CCND2P30279 289 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 MAGEA9P43362 315 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 HSD17B4P51659 736 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 STARD6P59095 220 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CSTF1Q05048 431 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 PPFIA1Q13136 1202 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 PGM5Q15124 567 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 GNPTABQ3T906 1256 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 N4BP2L1Q5TBK1 243 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 DCLRE1AQ6PJP8 1040 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 LRSAM1Q6UWE0 723 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMC5Q6UXY8 1006 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 C15orf39Q6ZRI6 1047 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CABP7Q86V35 215 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 KDF1Q8NAX2 398 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 RRP36Q96EU6 259 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZNF274Q96GC6 653 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 FAM126AQ9BYI3 521 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMX1Q9H3N1 280 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 ELAC1Q9H777 363 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 SFXN1Q9H9B4 322 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 RGS18Q9NS28 235 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 TRPV2Q9Y5S1 764 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 IRAK3Q9Y616 596 aa10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CNOT1A5YKK6 2376 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-202ENST00000540486 CEP295Q9C0D2 2601 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 RRN3P2A6NIE6 340 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 HOXA2O43364 376 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZMYND10O75800 440 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 STAM2O75886 525 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 AK2P54819 239 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 GRIK4Q16099 956 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 MARCH8Q5T0T0 291 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 KANK3Q6NY19 840 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 NME8Q8N427 588 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 SLC22A17Q8WUG5 538 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 CELF4Q9BZC1 486 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMEM117Q9H0C3 514 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 ATP6V0A4Q9HBG4 840 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 NCOA5Q9HCD5 579 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMEM161AQ9NX61 479 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 EPS15L1Q9UBC2 864 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZZEF1O43149 2961 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 KDM3AQ9Y4C1 1321 aa10.06□□□□□ -0.8
TRAPPC1-202ENST00000540486 MYH6P13533 1939 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 SPATA31C2B4DYI2 1134 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 C9IYK1 514 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 MEIS2O14770 477 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 EPCAMP16422 314 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 HOXA13P31271 388 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 NEK4P51957 841 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 FAM189BP81408 668 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 LAIR1Q6GTX8 287 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 RSAD2Q8WXG1 361 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 STAMQ92783 540 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 TNPO1Q92973 898 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 TATDN2Q93075 761 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 ADAM2Q99965 735 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 SENP7Q9BQF6 1050 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 ERAP1Q9NZ08 941 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 RAB23Q9ULC3 237 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 SPEGQ15772 3267 aa10.05□□□□□ -0.8
TRAPPC1-202ENST00000540486 NID2Q14112 1375 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms