RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 FBXL16Q8N461 479 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 BCL7CQ8WUZ0 217 aaPredicted RBP22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 KCNB2Q92953 911 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 BRF1Q92994 677 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 RNF26Q9BY78 433 aaPredicted RBP22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 SEPT9Q9UHD8 586 aaPredicted RBP22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 PRR23AA6NEV1 266 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 MEIS3P2A8K0S8 358 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 LONRF3Q496Y0 759 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 Q4G0T1 1027 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 MIER3Q7Z3K6 550 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 GPR149Q86SP6 731 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 FEZF2Q8TBJ5 459 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 VPS13AQ96RL7 3174 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 VN1R3Q9BXE9 311 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 MFSD1Q9H3U5 465 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 VPS54Q9P1Q0 977 aa22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 SUCLA2Q9P2R7 463 aaPredicted RBP22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 PIN4Q9Y237 131 aaKnown RBP22.44■■□□□ 1.18
LPCAT3-210ENST00000540090 PLXNA3P51805 1871 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 TMEM150BA6NC51 233 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 MAFO75444 373 aaPredicted RBP22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 RAB27AP51159 221 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 FOXK2Q01167 660 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 PTPN14Q15678 1187 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 ACSF2Q96CM8 615 aaPredicted RBP22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 SH2D3AQ9BRG2 576 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 SFXN1Q9H9B4 322 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 DNAJB4Q9UDY4 337 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 INPP5FQ9Y2H2 1132 aa22.43■■□□□ 1.18
LPCAT3-210ENST00000540090 CYP3A7-CYP3A51PA0A087WV96 503 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 IFNAR1P17181 557 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 CYP3A7P24462 503 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 SLC11A1P49279 550 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 RNASELQ05823 741 aaKnown RBP22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 OTOP3Q7RTS5 596 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 CATSPER4Q7RTX7 472 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 ZNF280BQ86YH2 543 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 RHPN2Q8IUC4 686 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 TBCKQ8TEA7 893 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 KLHL5Q96PQ7 755 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 SLC26A6Q9BXS9 759 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 AGXT2Q9BYV1 514 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 SH3GLB2Q9NR46 395 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 STK39Q9UEW8 545 aa22.42■■□□□ 1.18
LPCAT3-210ENST00000540090 LILRB3O75022 631 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 CWF19L1Q69YN2 538 aaKnown RBP22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 KSR1Q8IVT5 923 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 PGBD4Q96DM1 585 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 JAKMIP1Q96N16 626 aaKnown RBP22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 C22orf23Q9BZE7 217 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 GBP3Q9H0R5 595 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 PCDHB2Q9Y5E7 798 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 FAM186AA6NE01 2351 aa22.41■■□□□ 1.18
LPCAT3-210ENST00000540090 WDR81Q562E7 1941 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 DDX11L8A8MPP1 907 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 B4GALT3O60512 393 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 CNPP09543 421 aaKnown RBP22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 NPR3P17342 541 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 CLCN4P51793 760 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 NLRP5P59047 1200 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 TDGQ13569 410 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 BLOC1S2Q6QNY1 142 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 AGMOQ6ZNB7 445 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 CCDC149Q6ZUS6 474 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 ANO5Q75V66 913 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 MRPL10Q7Z7H8 261 aaKnown RBP22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 NKD2Q969F2 451 aaPredicted RBP22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 JPH2Q9BR39 696 aaPredicted RBP22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 EMILIN2Q9BXX0 1053 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 IFT122Q9HBG6 1241 aa22.4■■□□□ 1.18
LPCAT3-210ENST00000540090 DDHD2O94830 711 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 ALDH2P05091 517 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 KLRC2P26717 231 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 C15orf39Q6ZRI6 1047 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 FRMD5Q7Z6J6 570 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 SKAP1Q86WV1 359 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 FLCNQ8NFG4 579 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 NLRP4Q96MN2 994 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 MBOAT7Q96N66 472 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 TMEM175Q9BSA9 504 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 KCNK12Q9HB15 430 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 AGPAT5Q9NUQ2 364 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 PCDHA4Q9UN74 947 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 SNX14Q9Y5W7 946 aa22.39■■□□□ 1.17
LPCAT3-210ENST00000540090 SPTBN4Q9H254 2564 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 PI15O43692 258 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 CDC45O75419 566 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 TDP2O95551 362 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 AOC1P19801 751 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 RPS6KB1P23443 525 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 PDIA3P30101 505 aaKnown RBP22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 AFF1P51825 1210 aaKnown RBP22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 EVCP57679 992 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 PSMC5P62195 406 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 LETM2Q2VYF4 491 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 ETNPPLQ8TBG4 499 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 URGCPQ8TCY9 931 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 KANSL3Q9P2N6 904 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 DUSP12Q9UNI6 340 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms