RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FAM86B2P0C5J1 330 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 HOXA7P31268 230 aaPredicted RBP15.04■□□□□ -0
SCNN1A-215ENST00000540037 NCALDP61601 193 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 QRICH1Q2TAL8 776 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 EXOC3L1Q86VI1 746 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 ETNPPLQ8TBG4 499 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 BTBD6Q96KE9 485 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 CRAMP1Q96RY5 1269 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 SYT11Q9BT88 431 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 STK38LQ9Y2H1 464 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 PCDHA1Q9Y5I3 950 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 KIF13BQ9NQT8 1826 aa15.04■□□□□ -0
SCNN1A-215ENST00000540037 MYO3BQ8WXR4 1341 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 TCP11X1B4DZS4 312 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 CYP2J2P51589 502 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ITIH4Q14624 930 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 FAM186BQ8IYM0 893 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ACP6Q9NPH0 428 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ZMYM2Q9UBW7 1377 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 NHSQ6T4R5 1651 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 FAM196BA6NMK8 535 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 FOXN3O00409 490 aaPredicted RBP15.03■□□□□ -0
SCNN1A-215ENST00000540037 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
SCNN1A-215ENST00000540037 RIPK2O43353 540 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 SNX3O60493 162 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 UFL1O94874 794 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ACSL3O95573 720 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 TTLL1O95922 423 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 GH1P01241 217 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 PDE6BP35913 854 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 PPP2R5AQ15172 486 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ZKSCAN8Q15776 578 aaPredicted RBP15.03■□□□□ -0
SCNN1A-215ENST00000540037 GDAP1Q8TB36 358 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ECT2Q9H8V3 914 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 PCDHA3Q9Y5H8 950 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 EML1O00423 815 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 RASGRF2O14827 1237 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 GNPATO15228 680 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 RTN2O75298 545 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 KRT16P08779 473 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 LMNB1P20700 586 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 TNFAIP3P21580 790 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 FMO5P49326 533 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 CCDC137Q6PK04 289 aaKnown RBP15.03■□□□□ -0
SCNN1A-215ENST00000540037 SEPT14Q6ZU15 432 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 ANKRD42Q8N9B4 389 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 EBF2Q9HAK2 575 aa15.03■□□□□ -0
SCNN1A-215ENST00000540037 IGKV6D-41A0A0C4DH26 115 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 MEIS2O14770 477 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 ARHGAP4P98171 946 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 GABPAQ06546 454 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 CRYMQ14894 314 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 PHLDB3Q6NSJ2 640 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 STK33Q9BYT3 514 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 METTL14Q9HCE5 456 aaKnown RBP15.02■□□□□ -0
SCNN1A-215ENST00000540037 CTTNBP2NLQ9P2B4 639 aa15.02■□□□□ -0
SCNN1A-215ENST00000540037 DIAPH2O60879 1101 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 PHF2O75151 1096 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 AGTP01019 485 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 PYGMP11217 842 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 NQO1P15559 274 aaKnown RBP15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 CTTNQ14247 550 aaKnown RBP15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 MESDQ14696 234 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 USH1GQ495M9 461 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 C6orf118Q5T5N4 469 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 MAEAQ7L5Y9 396 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 DYDC1Q8WWB3 177 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 LENG9Q96B70 501 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 ZNF570Q96NI8 536 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 NARFQ9UHQ1 456 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 DAGLAQ9Y4D2 1042 aa15.02□□□□□ -0.01
SCNN1A-215ENST00000540037 FAM187AA6NFU0 413 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 RPA1P27694 616 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 DHX34Q14147 1143 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 TNIP1Q15025 636 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 C15orf41Q9Y2V0 281 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 PFASO15067 1338 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 SPATA31A1Q5TZJ5 1347 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 TBCAO75347 108 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 FTLP02792 175 aaPredicted RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 GSTA1P08263 222 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 MPP2Q14168 576 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 NUGGCQ68CJ6 796 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 ERICH1Q86X53 443 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 COL23A1Q86Y22 540 aaPredicted RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 CCDC105Q8IYK2 499 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 MYCT1Q8N699 235 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 L3MBTL3Q96JM7 780 aaPredicted RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 PWWP2AQ96N64 755 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 MXD3Q9BW11 206 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 INTS2Q9H0H0 1204 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 TMEM120BA0PK00 339 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 UPP2O95045 317 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 COMTP21964 271 aa15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 HOXA13P31271 388 aaPredicted RBP15.01□□□□□ -0.01
SCNN1A-215ENST00000540037 ADCY2Q08462 1091 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms