RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CTAGE4Q8IX94 777 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 SLC7A3Q8WY07 619 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 STK33Q9BYT3 514 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
SPARC-209ENST00000539687 BTBD7Q9P203 1132 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 APEX2Q9UBZ4 518 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 TBX20Q9UMR3 447 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 IGKV6D-21A0A0A0MT36 114 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 DENND3A2RUS2 1198 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 ASB14A6NK59 587 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 SLC16A4O15374 487 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 ERCC3P19447 782 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 NAMPTP43490 491 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 NPTX2P47972 431 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 JAM2P57087 298 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
SPARC-209ENST00000539687 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
SPARC-209ENST00000539687 ELF2Q15723 593 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 LDLRAD1Q5T700 205 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 PLA2G4FQ68DD2 849 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 SLFN12LQ6IEE8 588 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 MAEAQ7L5Y9 396 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 TRAPPC11Q7Z392 1133 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 TMEM161BQ8NDZ6 487 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 MMP19Q99542 508 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SPARC-209ENST00000539687 AZI2Q9H6S1 392 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
SPARC-209ENST00000539687 NKRFO15226 690 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPARC-209ENST00000539687 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 STBD1O95210 358 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 LDHAP00338 332 aaKnown RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 CETPP11597 493 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 SLC9A1P19634 815 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 SOX5P35711 763 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 GCLCP48506 637 aaPredicted RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 NPEPPSP55786 919 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 AMPD2Q01433 879 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 EMC2Q15006 297 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 SEPT14Q6ZU15 432 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 LMBR1Q8WVP7 490 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 RUBCNQ92622 972 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 PAGR1Q9BTK6 254 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPARC-209ENST00000539687 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
SPARC-209ENST00000539687 MLXIPQ9HAP2 919 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 PDLIM7Q9NR12 457 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
SPARC-209ENST00000539687 MYH11P35749 1972 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 A0A0A6YYK5 440 aaPredicted RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 F8VZ95 297 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 FANCGO15287 622 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ZNF862O60290 1169 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPARC-209ENST00000539687 ERLIN1O75477 346 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 CNMDO75829 334 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 PIGRP01833 764 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 PLEKP08567 350 aaPredicted RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 HSPA1AP0DMV8 641 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 HSPA1BP0DMV9 641 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 H2AFXP16104 143 aaPredicted RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 UBA1P22314 1058 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 CNGA1P29973 690 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 MXI1P50539 228 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 STAT5BP51692 787 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 GTF2A2P52657 109 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 EFNA5P52803 228 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 CYP27A1Q02318 531 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ITIH3Q06033 890 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 BRD3Q15059 726 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 NAB2Q15742 525 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ERCC6LQ2NKX8 1250 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 DPY19L2P1Q6NXN4 242 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 TMCO3Q6UWJ1 677 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 RSRC2Q7L4I2 434 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 CYFIP1Q7L576 1253 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 PLPPR4Q7Z2D5 763 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 IRF2BP2Q7Z5L9 587 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 DEPTORQ8TB45 409 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 MORC4Q8TE76 937 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms