RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 NFKBIZQ9BYH8 718 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 TNMDQ9H2S6 317 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 ADGRA3Q8IWK6 1321 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 ACTN4O43707 911 aaKnown RBP14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 EFCAB14O75071 495 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 FAM13AO94988 1023 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 PLS3P13797 630 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 SYKP43405 635 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 KCNJ6P48051 423 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 DSC3Q14574 896 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 FAM109BQ6ICB4 259 aaPredicted RBP14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 ZBTB8OSQ8IWT0 167 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 ADAM2Q99965 735 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 C2orf40Q9H1Z8 148 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 ZHX3Q9H4I2 956 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 C17orf75Q9HAS0 396 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 KMT5AQ9NQR1 393 aa14.04□□□□□ -0.16
TSPAN9-207ENST00000539631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 GRXCR1A8MXD5 290 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 SLC16A4O15374 487 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 TSPAN1O60635 241 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 AMHP03971 560 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 LIG1P18858 919 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 CASP1P29466 404 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 AFMP43652 599 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 ZNF131P52739 623 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 DMP1Q13316 513 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 AMHR2Q16671 573 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 GRAMD1CQ8IYS0 662 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 MYCT1Q8N699 235 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 TMEM87AQ8NBN3 555 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 SLC9A7Q96T83 725 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 LRRC27Q9C0I9 530 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 CCDC113Q9H0I3 377 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 MAGEF1Q9HAY2 307 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 PARVGQ9HBI0 331 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 RGS18Q9NS28 235 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 AGPAT5Q9NUQ2 364 aa14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 LARSQ9P2J5 1176 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-207ENST00000539631 TTC3P53804 2025 aa14.02□□□□□ -0.16
TSPAN9-207ENST00000539631 DENND3A2RUS2 1198 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 B4GALT5O43286 388 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 ERLIN2O94905 339 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 UPP2O95045 317 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 ZNF202O95125 648 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 EDN1P05305 212 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 PRKCBP05771 671 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 SLFN14P0C7P3 912 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 IDEP14735 1019 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 ATP2A2P16615 1042 aaKnown RBP14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 NCKAP1LP55160 1127 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 AMPD3Q01432 767 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 PHOSPHO2Q8TCD6 241 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 SPIRE2Q8WWL2 714 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 CPB2Q96IY4 423 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 NTPCRQ9BSD7 190 aaKnown RBP14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 TRIM9Q9C026 710 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 BLZF1Q9H2G9 400 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 FZD8Q9H461 694 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 PRMT7Q9NVM4 692 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 ARHGAP28Q9P2N2 729 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 USP25Q9UHP3 1055 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 USP20Q9Y2K6 914 aa14.02□□□□□ -0.17
TSPAN9-207ENST00000539631 CEP290O15078 2479 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 PHLPP2Q6ZVD8 1323 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 C9IYK1 514 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 K7ERI5 159 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 TRAK2O60296 914 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 ARF4P18085 180 aaPredicted RBP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 SARSP49591 514 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 EFNA5P52803 228 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 RABGGTBP53611 331 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 SMTNP53814 917 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 CUL4BQ13620 913 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 PCBP1Q15365 356 aaKnown RBP eCLIP14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 MAPK6Q16659 721 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 FAM187BQ17R55 369 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 LRIT3Q3SXY7 679 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
TSPAN9-207ENST00000539631 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms