RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 SAMD11Q96NU1 681 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 KIFC3Q9BVG8 833 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 RUSC1Q9BVN2 902 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 RC3H2Q9HBD1 1191 aaKnown RBP10.72□□□□□ -0.69
CELF1-219ENST00000539254 AGPAT5Q9NUQ2 364 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 FAM105AQ9NUU6 356 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 RNF19AQ9NV58 838 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
CELF1-219ENST00000539254 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
CELF1-219ENST00000539254 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
CELF1-219ENST00000539254 NPHP3-ACAD11A0A0J9YXS1 232 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 A0A0U1RQF3 1178 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 CCDC169A6NNP5 214 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 H3BNC9 293 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 TSPAN1O60635 241 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 EYA4O95677 639 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 LINC00271P0C7V0 271 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 ATF7P17544 494 aaPredicted RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 PBX3P40426 434 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 UBA7P41226 1012 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 MBTD1Q05BQ5 628 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 CLLU1OSQ5K130 101 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 ARL6IP4Q66PJ3 421 aaKnown RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 ZBTB8OSQ8IWT0 167 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 KLHL23Q8NBE8 558 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 CLIC6Q96NY7 704 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 EIF2AQ9BY44 585 aaKnown RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 TMEM117Q9H0C3 514 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 CHST12Q9NRB3 414 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
CELF1-219ENST00000539254 HES2Q9Y543 173 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 PCDHB2Q9Y5E7 798 aa10.71□□□□□ -0.69
CELF1-219ENST00000539254 COL4A4P53420 1690 aaPredicted RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 NT5C1B-RDH14C9J2C7 533 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 HOXA2O43364 376 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 HIP1RO75146 1068 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 NPTXRO95502 500 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 BMP15O95972 392 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 PLA2G4BP0C869 781 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 ARF4P18085 180 aaPredicted RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 MUTP22033 750 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 HOXA11P31270 313 aaPredicted RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 PEX3P56589 373 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 PKP1Q13835 747 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 PTPAQ15257 358 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 PTPROQ16827 1216 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 UBXN11Q5T124 520 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 RINT1Q6NUQ1 792 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 LRRC55Q6ZSA7 311 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 THNSL1Q8IYQ7 743 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 MICAL1Q8TDZ2 1067 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 CLP1Q92989 425 aaKnown RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 CALML4Q96GE6 196 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 C11orf84Q9BUA3 381 aaPredicted RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 PANK2Q9BZ23 570 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
CELF1-219ENST00000539254 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 IGFLR1Q9H665 355 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 CWH43Q9H720 699 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 RWDD3Q9Y3V2 267 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 PCDHB12Q9Y5F1 795 aa10.7□□□□□ -0.7
CELF1-219ENST00000539254 CHD7Q9P2D1 2997 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 EOMESO95936 686 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 POMCP01189 267 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 ITGB1P05556 798 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 PRKCBP05771 671 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 RB1P06400 928 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 SKIP12755 728 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 ITGA4P13612 1032 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 CA8P35219 290 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 TFF2Q03403 129 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
CELF1-219ENST00000539254 MCM6Q14566 821 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 STK38Q15208 465 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 TCEAL5Q5H9L2 206 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 USP49Q70CQ1 688 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 COLGALT1Q8NBJ5 622 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 POF1BQ8WVV4 589 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
CELF1-219ENST00000539254 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 ZHX3Q9H4I2 956 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 ZSCAN16Q9H4T2 348 aaPredicted RBP10.69□□□□□ -0.7
CELF1-219ENST00000539254 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
CELF1-219ENST00000539254 PARP2Q9UGN5 583 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms