RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CATSPER3Q86XQ3 398 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 C4orf19Q8IY42 314 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 FAM184AQ8NB25 1140 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 LRRC15Q8TF66 581 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 PRPF31Q8WWY3 499 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 ZNF689Q96CS4 500 aaPredicted RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 CEP170P1Q96L14 293 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 YME1L1Q96TA2 773 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 FDXACB1Q9BRP7 624 aaPredicted RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 PDCL3Q9H2J4 239 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 IFT122Q9HBG6 1241 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 PCDHA12Q9UN75 941 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 INSL6Q9Y581 213 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 DOCK5Q9H7D0 1870 aa8.09□□□□□ -1.12
LMO3-220ENST00000539232 MYH6P13533 1939 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 TTLL13PA6NNM8 815 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 M0QZ92 97 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 GRM6O15303 877 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 B4GALT3O60512 393 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 EFCAB14O75071 495 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 OR52Z1P0C646 297 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 SRGAP2CP0DJJ0 459 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
LMO3-220ENST00000539232 DNAJB1P25685 340 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 PBX3P40426 434 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 TERF1P54274 439 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 FAM189BP81408 668 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 PTGDRQ13258 359 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 EMC2Q15006 297 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
LMO3-220ENST00000539232 EPC2Q52LR7 807 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 XKR9Q5GH70 373 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 MCTP1Q6DN14 999 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 LRRC55Q6ZSA7 311 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 KCNK18Q7Z418 384 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 FRMD5Q7Z6J6 570 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 FERMT3Q86UX7 667 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 RHPN2Q8IUC4 686 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 TMEM192Q8IY95 271 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 SLFN12Q8IYM2 578 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 APBB2Q92870 758 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 LPPQ93052 612 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 NLRP4Q96MN2 994 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
LMO3-220ENST00000539232 MMTAG2Q9BU76 263 aaKnown RBP8.08□□□□□ -1.12
LMO3-220ENST00000539232 ZSWIM4Q9H7M6 989 aa8.08□□□□□ -1.12
LMO3-220ENST00000539232 DNAH14Q0VDD8 3507 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 FLNBO75369 2602 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 LYPLA2O95372 231 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 EDN1P05305 212 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 HOXA11P31270 313 aaPredicted RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 ARL2P36404 184 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 SARSP49591 514 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 RARRES1P49788 294 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 LAMTOR4Q0VGL1 99 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 TIGD5Q53EQ6 642 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 UBXN11Q5T124 520 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 EP400NLQ6ZTU2 488 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 ZNF598Q86UK7 904 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 RNF169Q8NCN4 708 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 MRPL38Q96DV4 380 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 ASIC4Q96FT7 647 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 CASD1Q96PB1 797 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 PLIN2Q99541 437 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 RGS18Q9NS28 235 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 IGSF5Q9NSI5 407 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 DLL3Q9NYJ7 618 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 RALYQ9UKM9 306 aaKnown RBP8.07□□□□□ -1.12
LMO3-220ENST00000539232 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 SQORQ9Y6N5 450 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 PTPRSQ13332 1948 aa8.07□□□□□ -1.12
LMO3-220ENST00000539232 ADGRA3Q8IWK6 1321 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 MYO7AQ13402 2215 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 DENND3A2RUS2 1198 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 TBKBP1A7MCY6 615 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 GPR182O15218 404 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 B4GALT5O43286 388 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 NCK2O43639 380 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 USO1O60763 962 aaKnown RBP8.06□□□□□ -1.12
LMO3-220ENST00000539232 BAG4O95429 457 aaKnown RBP8.06□□□□□ -1.12
LMO3-220ENST00000539232 ITGB1P05556 798 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
LMO3-220ENST00000539232 GLRA2P23416 452 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.12
LMO3-220ENST00000539232 BMPR1AP36894 532 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 POLGP54098 1239 aaPredicted RBP8.06□□□□□ -1.12
LMO3-220ENST00000539232 BTG3Q14201 252 aaPredicted RBP8.06□□□□□ -1.12
LMO3-220ENST00000539232 AMHR2Q16671 573 aa8.06□□□□□ -1.12
LMO3-220ENST00000539232 PTPROQ16827 1216 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms