RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 CYP26C1Q6V0L0 522 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 ZNF410Q86VK4 478 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 URGCPQ8TCY9 931 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 CCDC12Q8WUD4 166 aaPredicted RBP15.9■□□□□ 0.14
PBX3-212ENST00000538998 NXPE3Q969Y0 559 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 PGBD4Q96DM1 585 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 RHOBTB2Q9BYZ6 727 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 ZMYND12Q9H0C1 365 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 GBP3Q9H0R5 595 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 C6orf50Q9HD87 102 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 MRPL17Q9NRX2 175 aaKnown RBP15.9■□□□□ 0.14
PBX3-212ENST00000538998 FAM105AQ9NUU6 356 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 DPP7Q9UHL4 492 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 R4GN57 208 aa15.9■□□□□ 0.14
PBX3-212ENST00000538998 KRBA1A5PL33 1030 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 N4BP1O75113 896 aaKnown RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 ZNF623O75123 536 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 SSBP05455 408 aaKnown RBP eCLIP15.89■□□□□ 0.13
PBX3-212ENST00000538998 SRFP11831 508 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 SFNP31947 248 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 GBP2P32456 591 aaPredicted RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 JAK3P52333 1124 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 RCAN1P53805 252 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 TARBP2Q15633 366 aaKnown RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 UGCGQ16739 394 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 PFKFB3Q16875 520 aaPredicted RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 LENG9Q96B70 501 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 HINFPQ9BQA5 517 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 TBC1D17Q9HA65 648 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 MAN1C1Q9NR34 630 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 BRPF3Q9ULD4 1205 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 MYH9P35579 1960 aaKnown RBP15.89■□□□□ 0.13
PBX3-212ENST00000538998 CLUHO75153 1309 aa15.89■□□□□ 0.13
PBX3-212ENST00000538998 A0A087WZ62 844 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 MEIS3P2A8K0S8 358 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 LILRB3O75022 631 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 DRP2Q13474 957 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 PHLDB3Q6NSJ2 640 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 ZNF280BQ86YH2 543 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 RSAD2Q8WXG1 361 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 RIN2Q8WYP3 895 aaPredicted RBP15.88■□□□□ 0.13
PBX3-212ENST00000538998 RUBCNQ92622 972 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 RIT2Q99578 217 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 FDXACB1Q9BRP7 624 aaPredicted RBP15.88■□□□□ 0.13
PBX3-212ENST00000538998 CA14Q9ULX7 337 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 SSX2IPQ9Y2D8 614 aa15.88■□□□□ 0.13
PBX3-212ENST00000538998 IGKV6-21A0A0C4DH24 114 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 CCDC195A0A1B0GUA6 201 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 CHMP2AO43633 222 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 B4GALT3O60512 393 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 GAS7O60861 476 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 URODP06132 367 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 ADH1AP07327 375 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 GNA11P29992 359 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 CATSPER4Q7RTX7 472 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 SLC44A3Q8N4M1 653 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 FAM193BQ96PV7 902 aaPredicted RBP15.87■□□□□ 0.13
PBX3-212ENST00000538998 TMEM175Q9BSA9 504 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 NIFKQ9BYG3 293 aaKnown RBP15.87■□□□□ 0.13
PBX3-212ENST00000538998 FAM217BQ9NTX9 383 aaPredicted RBP15.87■□□□□ 0.13
PBX3-212ENST00000538998 KANSL3Q9P2N6 904 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 SEPT9Q9UHD8 586 aaPredicted RBP15.87■□□□□ 0.13
PBX3-212ENST00000538998 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 SIT1Q9Y3P8 196 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 CNTNAP2Q9UHC6 1331 aa15.87■□□□□ 0.13
PBX3-212ENST00000538998 KLF18A0A0U1RQI7 1052 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 MSH4O15457 936 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 GLUD1P00367 558 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 SOD2P04179 222 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 ALDH2P05091 517 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 CDC27P30260 824 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 AK2P54819 239 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
PBX3-212ENST00000538998 MTERF2Q49AM1 385 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 XKR3Q5GH77 459 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 SPECC1Q5M775 1068 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 RDM1Q8NG50 284 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 RPS6KC1Q96S38 1066 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 ESYT1Q9BSJ8 1104 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 TEKT3Q9BXF9 490 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 RSAD1Q9HA92 442 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 ARHGEF3Q9NR81 526 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 DLL3Q9NYJ7 618 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 SUCLA2Q9P2R7 463 aaPredicted RBP15.86■□□□□ 0.13
PBX3-212ENST00000538998 PCDHB2Q9Y5E7 798 aa15.86■□□□□ 0.13
PBX3-212ENST00000538998 EP300Q09472 2414 aaPredicted RBP15.86■□□□□ 0.13
PBX3-212ENST00000538998 DMXL1Q9Y485 3027 aa15.85■□□□□ 0.13
PBX3-212ENST00000538998 CCDC196A0A1B0GTZ2 297 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms