RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CMA1P23946 247 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 NPTX2P47972 431 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 PEX3P56589 373 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 DYMQ7RTS9 669 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 FSIP1Q8NA03 581 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 RASSF8Q8NHQ8 419 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 HPS3Q969F9 1004 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 CPB2Q96IY4 423 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 SCLT1Q96NL6 688 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 SCAND2PQ9GZW5 306 aaPredicted RBP14.49□□□□□ -0.09
CHFR-216ENST00000538235 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
CHFR-216ENST00000538235 AGPAT5Q9NUQ2 364 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 KBTBD4Q9NVX7 518 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 ARHGAP28Q9P2N2 729 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 HCSTQ9UBK5 93 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 ATP6V1DQ9Y5K8 247 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 ABHD14A-ACY1A0A1B0GW23 586 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 A0A1W2PQ27 194 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 A0A1W2PQ64 194 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 A0A1W2PQD8 194 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 C9IYK1 514 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 BAIAP3O94812 1187 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 LINC00271P0C7V0 271 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 LIG1P18858 919 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 NAMPTP43490 491 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 DNM2P50570 870 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 CASP5P51878 434 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 LONRF3Q496Y0 759 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 EEF1DP3Q658K8 133 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 FAM117BQ6P1L5 589 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 CCDC73Q6ZRK6 1079 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 TMEM87AQ8NBN3 555 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 ENGASEQ8NFI3 743 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 DDX12PQ92771 950 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 ADAM2Q99965 735 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 NFKBIZQ9BYH8 718 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 PBX4Q9BYU1 374 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
CHFR-216ENST00000538235 CCDC39Q9UFE4 941 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 REV3LO60673 3130 aa14.48□□□□□ -0.09
CHFR-216ENST00000538235 TRANK1O15050 2925 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 A0A1W2PPC1 479 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 FRMD3A2A2Y4 597 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 ABLIM1O14639 778 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 SLC16A4O15374 487 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 ARF4P18085 180 aaPredicted RBP14.47□□□□□ -0.09
CHFR-216ENST00000538235 TXLNAP40222 546 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 FXR1P51114 621 aaKnown RBP eCLIP14.47□□□□□ -0.09
CHFR-216ENST00000538235 NCKAP1LP55160 1127 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 SNW1Q13573 536 aaKnown RBP14.47□□□□□ -0.09
CHFR-216ENST00000538235 MXD4Q14582 209 aaPredicted RBP14.47□□□□□ -0.09
CHFR-216ENST00000538235 LRIT3Q3SXY7 679 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 NT5DC1Q5TFE4 455 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 SRGAP1Q7Z6B7 1085 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 SFR1Q86XK3 245 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 HERC6Q8IVU3 1022 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 MYOCDQ8IZQ8 938 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 KCTD17Q8N5Z5 321 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 USP38Q8NB14 1042 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 TMEM161BQ8NDZ6 487 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 APBB2Q92870 758 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 EIF2AQ9BY44 585 aaKnown RBP14.47□□□□□ -0.09
CHFR-216ENST00000538235 TRIM9Q9C026 710 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 BLZF1Q9H2G9 400 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 FZD8Q9H461 694 aa14.47□□□□□ -0.09
CHFR-216ENST00000538235 CNTNAP2Q9UHC6 1331 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 MEFVO15553 781 aaPredicted RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 ASAP2O43150 1006 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 KLRC4O43908 158 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 PLS3P13797 630 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 ATP2A2P16615 1042 aaKnown RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 NMT1P30419 496 aaKnown RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 PHKA2P46019 1235 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 EHHADHQ08426 723 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 CUL4BQ13620 913 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 IKBKEQ14164 716 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 CATSPER4Q7RTX7 472 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 ZNF598Q86UK7 904 aaKnown RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 EXOC8Q8IYI6 725 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 FMR1NBQ8N0W7 255 aaPredicted RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 MRPS27Q92552 414 aaKnown RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 KIFAP3Q92845 792 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 INO80BQ9C086 356 aaPredicted RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 HAPLN2Q9GZV7 340 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 RGS18Q9NS28 235 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 ODF2LQ9ULJ1 636 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 PIN4Q9Y237 131 aaKnown RBP14.46□□□□□ -0.09
CHFR-216ENST00000538235 SLC4A7Q9Y6M7 1214 aa14.46□□□□□ -0.09
CHFR-216ENST00000538235 TISP43B9A030 160 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 GPR182O15218 404 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 B4GALT3O60512 393 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 PPP1R37O75864 691 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 GJB5O95377 273 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 PRKCBP05771 671 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms