RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 LONRF3Q496Y0 759 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 TMEM119Q4V9L6 283 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 ARSHQ5FYA8 562 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 C1orf186Q6ZWK4 172 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 BRAPQ7Z569 592 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 SRGAP1Q7Z6B7 1085 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 MRPL10Q7Z7H8 261 aaKnown RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 SMG8Q8ND04 991 aaKnown RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 SPPL3Q8TCT6 385 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 SNX29Q8TEQ0 813 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 TCP11Q8WWU5 503 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 USP28Q96RU2 1077 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 PLIN2Q99541 437 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 EIF2AQ9BY44 585 aaKnown RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 POLR3FQ9H1D9 316 aaPredicted RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 BHMT2Q9H2M3 363 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 RNF39Q9H2S5 420 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
SPARC-208ENST00000538026 PLAGL2Q9UPG8 496 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 TCHHQ07283 1943 aa9.34□□□□□ -0.91
SPARC-208ENST00000538026 TBKBP1A7MCY6 615 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 STX6O43752 255 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 OFD1O75665 1012 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 EYA4O95677 639 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 ITGB1P05556 798 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 CTNNB1P35222 781 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 PBX3P40426 434 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 SLC12A3P55017 1021 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 TFF2Q03403 129 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 GPM6BQ13491 265 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 MXD4Q14582 209 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 ARL6IP4Q66PJ3 421 aaKnown RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 CDCA2Q69YH5 1023 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 RINT1Q6NUQ1 792 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 AGMOQ6ZNB7 445 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 FAM43BQ6ZT52 329 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 TAS1R3Q7RTX0 852 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CDR2LQ86X02 465 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 EXOC8Q8IYI6 725 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 ERMNQ8TAM6 284 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CPB2Q96IY4 423 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 SCLT1Q96NL6 688 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CLIC6Q96NY7 704 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 KIFC3Q9BVG8 833 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 NFKBIZQ9BYH8 718 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CCDC113Q9H0I3 377 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CXCL16Q9H2A7 254 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 FZD8Q9H461 694 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 CHST12Q9NRB3 414 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 BLOC1S4Q9NUP1 217 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 LMCD1Q9NZU5 365 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 FBXO2Q9UK22 296 aaPredicted RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 PIN4Q9Y237 131 aaKnown RBP9.33□□□□□ -0.92
SPARC-208ENST00000538026 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 PCDHB2Q9Y5E7 798 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
SPARC-208ENST00000538026 NPHP3-ACAD11A0A0J9YXS1 232 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 ARHGEF35A5YM69 484 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 EOMESO95936 686 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 RB1P06400 928 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 STAG3L1P0CL83 205 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 ZSCAN20P17040 1043 aaPredicted RBP9.32□□□□□ -0.92
SPARC-208ENST00000538026 PDCP20941 246 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 SFPQP23246 707 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPARC-208ENST00000538026 MARCKSP29966 332 aaPredicted RBP9.32□□□□□ -0.92
SPARC-208ENST00000538026 IRS1P35568 1242 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 COL19A1Q14993 1142 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 SPECC1Q5M775 1068 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 ODR4Q5SWX8 454 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 NT5DC1Q5TFE4 455 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 KRT79Q5XKE5 535 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
SPARC-208ENST00000538026 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPARC-208ENST00000538026 MICALL1Q8N3F8 863 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 GSTCDQ8NEC7 633 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 MRPL38Q96DV4 380 aaKnown RBP9.32□□□□□ -0.92
SPARC-208ENST00000538026 EPSTI1Q96J88 318 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 SAMD11Q96NU1 681 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 INO80BQ9C086 356 aaPredicted RBP9.32□□□□□ -0.92
SPARC-208ENST00000538026 TMEM117Q9H0C3 514 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 MIOSQ9NXC5 875 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 HES2Q9Y543 173 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 DMDP11532 3685 aa9.32□□□□□ -0.92
SPARC-208ENST00000538026 A0A087X0B3 334 aa9.31□□□□□ -0.92
SPARC-208ENST00000538026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
SPARC-208ENST00000538026 A0A1B0GUA9 196 aa9.31□□□□□ -0.92
SPARC-208ENST00000538026 SFI1A8K8P3 1242 aa9.31□□□□□ -0.92
SPARC-208ENST00000538026 INO80B-WBP1J3KQ70 363 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms