RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 HPCAP84074 193 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 TOM1L2Q6ZVM7 507 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 SCUBE1Q8IWY4 988 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.48□□□□□ -0.57
RTN3-208ENST00000537981 FAM114A2Q9NRY5 505 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 CTTNBP2NLQ9P2B4 639 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 SUN2Q9UH99 717 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 TRIM43BA6NCK2 446 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 ANKRD63C9JTQ0 380 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 O00370 1275 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 VIL1P09327 827 aaKnown RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 USP11P51784 963 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 EIF3BP55884 814 aaKnown RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 OLFML1Q6UWY5 402 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 ARHGAP18Q8N392 663 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 EIF1ADQ8N9N8 165 aaKnown RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 SMYD1Q8NB12 490 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 LRRC59Q96AG4 307 aaKnown RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 IQSEC3Q9UPP2 1182 aaPredicted RBP11.48□□□□□ -0.57
RTN3-208ENST00000537981 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 GMEB1Q9Y692 573 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 RBAK-RBAKDNI3L0D1 243 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 PLSCR1O15162 318 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 AGTP01019 485 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 FGGP02679 453 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 SKIP12755 728 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 NAT1P18440 290 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 KRT2P35908 639 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 FOXO4P98177 505 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 TNFAIP8L3Q5GJ75 292 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 ZNF530Q6P9A1 599 aaPredicted RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 C4orf50Q6ZRC1 276 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 C14orf80Q86SX3 495 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 SAPCD2Q86UD0 394 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 SESTD1Q86VW0 696 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 LRRC57Q8N9N7 239 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 KIAA0895Q8NCT3 520 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 ESR2Q92731 530 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 CUEDC2Q9H467 287 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 PFASO15067 1338 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 MROH7Q68CQ1 1323 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 C5P01031 1676 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 STK10O94804 968 aaKnown RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 VAV1P15498 845 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 DCAF12L1Q5VU92 463 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 PRR11Q96HE9 360 aaPredicted RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 CADM1Q9BY67 442 aaKnown RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 DISC1Q9NRI5 854 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
RTN3-208ENST00000537981 DNAJC17Q9NVM6 304 aaKnown RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 FBXO9Q9UK97 447 aaPredicted RBP11.47□□□□□ -0.57
RTN3-208ENST00000537981 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 RASGRF2O14827 1237 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 CCDC166P0CW27 439 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 PLCG2P16885 1265 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 CCNE1P24864 410 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 SKIV2L2P42285 1042 aaKnown RBP11.46□□□□□ -0.57
RTN3-208ENST00000537981 CASP7P55210 303 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 OXCT1P55809 520 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 OCRLQ01968 901 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 RNF43Q68DV7 783 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 INTS8Q75QN2 995 aaKnown RBP11.46□□□□□ -0.57
RTN3-208ENST00000537981 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 CKAP2Q8WWK9 683 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 WASF1Q92558 559 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 ARHGEF2Q92974 986 aaKnown RBP11.46□□□□□ -0.57
RTN3-208ENST00000537981 NAPBQ9H115 298 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 PDP2Q9P2J9 529 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 TBK1Q9UHD2 729 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 EFR3BQ9Y2G0 817 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 HEMK1Q9Y5R4 338 aaPredicted RBP11.46□□□□□ -0.57
RTN3-208ENST00000537981 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
RTN3-208ENST00000537981 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.57
RTN3-208ENST00000537981 USP1O94782 785 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms