RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RUNDC3BQ96NL0 473 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SRPK1Q96SB4 655 aaKnown RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 EDEM3Q9BZQ6 932 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TMEM60Q9H2L4 133 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 EPB41L4BQ9H329 900 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 KCNK9Q9NPC2 374 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 DDX18Q9NVP1 670 aaKnown RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PAG1Q9NWQ8 432 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 CHKBQ9Y259 395 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 STXBP5LQ9Y2K9 1186 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 GDAQ9Y2T3 454 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 GPC6Q9Y625 555 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 C4AP0C0L4 1744 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 MRC1P22897 1456 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SH3PXD2BA1X283 911 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 CCDC160A6NGH7 325 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 ZNF213O14771 459 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 MGEA5O60502 916 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 CRABP2P29373 138 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 GTF2H1P32780 548 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 HAND2P61296 217 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 STRN3Q13033 797 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 AUHQ13825 339 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 NTRK3Q16288 839 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 FAAH2Q6GMR7 532 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 APOA5Q6Q788 366 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 ARHGAP27Q6ZUM4 889 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 ARHGAP24Q8N264 748 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 DTX3LQ8TDB6 740 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 MCUR1Q96AQ8 359 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 HSPBAP1Q96EW2 488 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 STK33Q9BYT3 514 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 NT5C3AQ9H0P0 336 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 NKIRAS1Q9NYS0 192 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 MTRF1LQ9UGC7 380 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 NOC2LQ9Y3T9 749 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 TTLL3Q9Y4R7 772 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 MAST3O60307 1309 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 RNF113AO15541 343 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 T-ENOLP0DO92 83 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 ITGA6P23229 1130 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 NEK3P51956 506 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 SLC39A6Q13433 755 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 GRM2Q14416 872 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 SEPT7Q16181 437 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 PACS1Q6VY07 963 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 MICU3Q86XE3 530 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 PLEKHO2Q8TD55 490 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 USP33Q8TEY7 942 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 SUCLG2Q96I99 432 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 CNOT6LQ96LI5 555 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 PARVBQ9HBI1 364 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 TRPC7Q9HCX4 862 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 DNAJB4Q9UDY4 337 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
SRGAP1-202ENST00000537556 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 LRRC53A6NM62 1247 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TPPPO94811 219 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 KLRC1P26715 233 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 VPS41P49754 854 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PPIDQ08752 370 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DMPKQ09013 629 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 VWA3BQ502W6 1294 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ZNF394Q53GI3 561 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DEPDC1Q5TB30 811 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DSTYKQ6XUX3 929 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PPP1R21Q6ZMI0 780 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 KBTBD2Q8IY47 623 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ANKRD42Q8N9B4 389 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ESR2Q92731 530 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 CLIP3Q96DZ5 547 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 QPCTLQ9NXS2 382 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DBR1Q9UK59 544 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 GOLGA8TH3BQL2 631 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 SPTLC1O15269 473 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 GOLGA8HP0CJ92 632 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DRG2P55039 364 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 IL9RQ01113 521 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ASPHQ12797 758 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 CGB2Q6NT52 195 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 SFR1Q86XK3 245 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 VPS52Q8N1B4 723 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ERP44Q9BS26 406 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TRIM31Q9BZY9 425 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 MRPL46Q9H2W6 279 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 MMRN2Q9H8L6 949 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 FAM207AQ9NSI2 230 aaPredicted RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TCP11L1Q9NUJ3 509 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms