RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 TRAIPQ9BWF2 469 aa25.74■■□□□ 1.71
CHFR-215ENST00000537551 TMEM117Q9H0C3 514 aa25.74■■□□□ 1.71
CHFR-215ENST00000537551 FAM105AQ9NUU6 356 aa25.74■■□□□ 1.71
CHFR-215ENST00000537551 SSBP05455 408 aaKnown RBP eCLIP25.73■■□□□ 1.71
CHFR-215ENST00000537551 PDIA4P13667 645 aaKnown RBP25.73■■□□□ 1.71
CHFR-215ENST00000537551 MARCKSP29966 332 aaPredicted RBP25.73■■□□□ 1.71
CHFR-215ENST00000537551 RAB27AP51159 221 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 MBTD1Q05BQ5 628 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 FOXD4L5Q5VV16 416 aaPredicted RBP25.73■■□□□ 1.71
CHFR-215ENST00000537551 ZBTB8OSQ8IWT0 167 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 KCTD17Q8N5Z5 321 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 RASSF8Q8NHQ8 419 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 FOXD4L4Q8WXT5 416 aaPredicted RBP25.73■■□□□ 1.71
CHFR-215ENST00000537551 CALML4Q96GE6 196 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 IFT74Q96LB3 600 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 NFKBIZQ9BYH8 718 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 LMCD1Q9NZU5 365 aa25.73■■□□□ 1.71
CHFR-215ENST00000537551 CHD7Q9P2D1 2997 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 LINC00271P0C7V0 271 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 AXLP30530 894 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 HOXA11P31270 313 aaPredicted RBP25.72■■□□□ 1.71
CHFR-215ENST00000537551 GRIN1Q05586 938 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 PPP2R5AQ15172 486 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 PTPAQ15257 358 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 LONRF3Q496Y0 759 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 ZNF598Q86UK7 904 aaKnown RBP25.72■■□□□ 1.71
CHFR-215ENST00000537551 KIFAP3Q92845 792 aa25.72■■□□□ 1.71
CHFR-215ENST00000537551 C11orf84Q9BUA3 381 aaPredicted RBP25.72■■□□□ 1.71
CHFR-215ENST00000537551 TYW1Q9NV66 732 aaKnown RBP25.72■■□□□ 1.71
CHFR-215ENST00000537551 C5orf67F2Z3F1 127 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 SLC26A4O43511 780 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 TSPAN1O60635 241 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 SKIV2LQ15477 1246 aaKnown RBP25.71■■□□□ 1.71
CHFR-215ENST00000537551 PTPROQ16827 1216 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 RINT1Q6NUQ1 792 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 DEPTORQ8TB45 409 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 HELQQ8TDG4 1101 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 BSNDQ8WZ55 320 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 CPB2Q96IY4 423 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 CASD1Q96PB1 797 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 USP28Q96RU2 1077 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 PLVAPQ9BX97 442 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 C2orf40Q9H1Z8 148 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 AAASQ9NRG9 546 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 RNF19AQ9NV58 838 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 PCDHB2Q9Y5E7 798 aa25.71■■□□□ 1.71
CHFR-215ENST00000537551 NLRC5Q86WI3 1866 aa25.7■■□□□ 1.71
CHFR-215ENST00000537551 ATF7P17544 494 aaPredicted RBP25.7■■□□□ 1.7
CHFR-215ENST00000537551 NAMPTP43490 491 aa25.7■■□□□ 1.7
CHFR-215ENST00000537551 NOTUMQ6P988 496 aa25.7■■□□□ 1.7
CHFR-215ENST00000537551 LPPQ93052 612 aa25.7■■□□□ 1.7
CHFR-215ENST00000537551 PGBD4Q96DM1 585 aa25.7■■□□□ 1.7
CHFR-215ENST00000537551 ZNF396Q96N95 335 aaPredicted RBP25.7■■□□□ 1.7
CHFR-215ENST00000537551 COL6A3P12111 3177 aa25.7■■□□□ 1.7
CHFR-215ENST00000537551 COL4A4P53420 1690 aaPredicted RBP25.69■■□□□ 1.7
CHFR-215ENST00000537551 ZNF623O75123 536 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 PLA2G4BP0C869 781 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 TMEM119Q4V9L6 283 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 CLLU1OSQ5K130 101 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 SYT2Q8N9I0 419 aaPredicted RBP25.69■■□□□ 1.7
CHFR-215ENST00000537551 RUSC1Q9BVN2 902 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 CSRNP2Q9H175 543 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 PRMT7Q9NVM4 692 aaPredicted RBP25.69■■□□□ 1.7
CHFR-215ENST00000537551 PCDHB12Q9Y5F1 795 aa25.69■■□□□ 1.7
CHFR-215ENST00000537551 SRPRBQ9Y5M8 271 aaKnown RBP25.69■■□□□ 1.7
CHFR-215ENST00000537551 PRRC2BQ5JSZ5 2229 aaKnown RBP25.69■■□□□ 1.7
CHFR-215ENST00000537551 RALGAPA2Q2PPJ7 1873 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 HIP1RO75146 1068 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 ZSCAN22P10073 491 aaPredicted RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 ARF4P18085 180 aaPredicted RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 LIG1P18858 919 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 AMHR2Q16671 573 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 TMEM132AQ24JP5 1023 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 SPECC1Q5M775 1068 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 CDCA2Q69YH5 1023 aaPredicted RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 C1orf186Q6ZWK4 172 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 LRRC43Q8N309 656 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 MRPL38Q96DV4 380 aaKnown RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 CCDC51Q96ER9 411 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 HCSTQ9UBK5 93 aa25.68■■□□□ 1.7
CHFR-215ENST00000537551 FBXO2Q9UK22 296 aaPredicted RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 FNDC1Q4ZHG4 1894 aaPredicted RBP25.68■■□□□ 1.7
CHFR-215ENST00000537551 B4GALT5O43286 388 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 SLC39A14Q15043 492 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 KARSQ15046 597 aaKnown RBP25.67■■□□□ 1.7
CHFR-215ENST00000537551 STK38Q15208 465 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 MAPK6Q16659 721 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 NAALADL2Q58DX5 795 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 UBXN11Q5T124 520 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 GLB1LQ6UWU2 654 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.67■■□□□ 1.7
CHFR-215ENST00000537551 KLHL23Q8NBE8 558 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 CNNM3Q8NE01 707 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 P2RX5Q93086 422 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 DRC1Q96MC2 740 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 CLIC6Q96NY7 704 aa25.67■■□□□ 1.7
CHFR-215ENST00000537551 TRIM6Q9C030 488 aaPredicted RBP25.67■■□□□ 1.7
CHFR-215ENST00000537551 ALG13Q9NP73 1137 aaKnown RBP25.67■■□□□ 1.7
CHFR-215ENST00000537551 TFIP11Q9UBB9 837 aaKnown RBP25.67■■□□□ 1.7
CHFR-215ENST00000537551 PLAGL2Q9UPG8 496 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms