RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BCAS3Q9H6U6 928 aa14.75□□□□□ -0.05
SMG6-203ENST00000536871 SPON1Q9HCB6 807 aa14.75□□□□□ -0.05
SMG6-203ENST00000536871 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
SMG6-203ENST00000536871 LOC102724159A0A0B4J2E5 919 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 EVI5O60447 810 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 ATG7O95352 703 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 SLC25A27O95847 323 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 RHOXF2BP0C7M4 288 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 TGFB3P10600 412 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 GARTP22102 1010 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 KLRC1P26715 233 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 NPTX2P47972 431 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 ACTR2P61160 394 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 VGLL4Q14135 290 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 DRAP1Q14919 205 aaPredicted RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 PWP2Q15269 919 aaKnown RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 BEND6Q5SZJ8 279 aaPredicted RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 MEI1Q5TIA1 1274 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 KCNV1Q6PIU1 500 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 MAEAQ7L5Y9 396 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 KSR1Q8IVT5 923 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 EXOC8Q8IYI6 725 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 NOA1Q8NC60 698 aaKnown RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 TAF4BQ92750 862 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 RHOXF2Q9BQY4 288 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 TLR10Q9BXR5 811 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 MAP2K7O14733 419 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 SLC16A4O15374 487 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 NEDD9Q14511 834 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 KIF22Q14807 665 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CBWD6Q4V339 395 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CBWD3Q5JTY5 395 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CBWD5Q5RIA9 395 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 PRAMEF18Q5VWM3 479 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 SWSAP1Q6NVH7 229 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 ERO1BQ86YB8 467 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 ZC3H15Q8WU90 426 aaKnown RBP14.74□□□□□ -0.05
SMG6-203ENST00000536871 PBKQ96KB5 322 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CAPZA3Q96KX2 299 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 FBXL18Q96ME1 805 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 FUT8Q9BYC5 575 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 VIPAS39Q9H9C1 493 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 CYP26B1Q9NR63 512 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 L1RE1Q9UN81 338 aa14.74□□□□□ -0.05
SMG6-203ENST00000536871 EMSYQ7Z589 1322 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 DENND3A2RUS2 1198 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 IRF6O14896 467 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 SRGAP2O75044 1071 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 PALMO75781 387 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 RGS20O76081 388 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 CNGA1P29973 690 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 MXI1P50539 228 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 PRKCEQ02156 737 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 APBA1Q02410 837 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 CLUL1Q15846 466 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 EPC2Q52LR7 807 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 ANKRD13AQ8IZ07 590 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 LOC285556D6RIA3 1793 aa14.73□□□□□ -0.05
SMG6-203ENST00000536871 A0A0G2JLL6 359 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 BUB1O43683 1085 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 ZC3H11AO75152 810 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMG6-203ENST00000536871 STBD1O95210 358 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 TMEM253P0C7T8 217 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 TRIM49P0CI25 452 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 TRIM49CP0CI26 452 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 RFC5P40937 340 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 IRX3P78415 501 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 RPS6KA1Q15418 735 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 PLA2G4FQ68DD2 849 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 KRT39Q6A163 491 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 PRRT2Q7Z6L0 340 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 LMO3Q8TAP4 145 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 PNKPQ96T60 521 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 CBWD1Q9BRT8 395 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 EPC1Q9H2F5 836 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 TMEM8AQ9HCN3 771 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 CALCOCO1Q9P1Z2 691 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 SEPT9Q9UHD8 586 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 SALL4Q9UJQ4 1053 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 DIS3Q9Y2L1 958 aaKnown RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 COQ4Q9Y3A0 265 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 MAFBQ9Y5Q3 323 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 ZNF862O60290 1169 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 TNFAIP3P21580 790 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 EDNRBP24530 442 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 VSNL1P62760 191 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 FAM160B1Q5W0V3 765 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 ENOSF1Q7L5Y1 443 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 ANKRD13CQ8N6S4 541 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms