RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PLEKHG4Q58EX7 1191 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 BORAQ6PGQ7 559 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 GPR155Q7Z3F1 870 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 RTN4RL1Q86UN2 441 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-207ENST00000536634 KBTBD2Q8IY47 623 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 KIAA1958Q8N8K9 716 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 MFSD3Q96ES6 412 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ORAI3Q9BRQ5 295 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 BARX1Q9HBU1 254 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ADAM29Q9UKF5 820 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 PLAAQ9Y263 795 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 PTPN22Q9Y2R2 807 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ZDHHC9Q9Y397 364 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ASB1Q9Y576 335 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 RGPD8O14715 1765 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-207ENST00000536634 PPLO60437 1756 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 LRPPRCP42704 1394 aaKnown RBP7.58□□□□□ -1.2
CLIP1-207ENST00000536634 PLEKHH1Q9ULM0 1364 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ZNF891A8MT65 544 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-207ENST00000536634 GOLGA6L22H0YM25 854 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 CSF2RBP32927 897 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 ECE1P42892 770 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 STILQ15468 1287 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 EZH2Q15910 746 aaKnown RBP7.57□□□□□ -1.2
CLIP1-207ENST00000536634 SEPT7Q16181 437 aaKnown RBP7.57□□□□□ -1.2
CLIP1-207ENST00000536634 DPP8Q6V1X1 898 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-207ENST00000536634 LGI4Q8N135 537 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 NXPE1Q8N323 547 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 AJUBAQ96IF1 538 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 BDH2Q9BUT1 245 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 BTBD2Q9BX70 525 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 H2AFY2Q9P0M6 372 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-207ENST00000536634 CCDC144AA2RUR9 1427 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 TNS3Q68CZ2 1445 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 CAMTA1Q9Y6Y1 1673 aa7.57□□□□□ -1.2
CLIP1-207ENST00000536634 NUP188Q5SRE5 1749 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 H7C1D1 291 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 ATP2A2P16615 1042 aaKnown RBP7.56□□□□□ -1.2
CLIP1-207ENST00000536634 SLC9A1P19634 815 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 PTX3P26022 381 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-207ENST00000536634 CD83Q01151 205 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 TOP3AQ13472 1001 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-207ENST00000536634 WDR72Q3MJ13 1102 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 TBC1D10BQ4KMP7 808 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-207ENST00000536634 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 KATNBL1Q9H079 304 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 OR10A5Q9H207 317 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
CLIP1-207ENST00000536634 RREB1Q92766 1687 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 THSD7AQ9UPZ6 1657 aa7.56□□□□□ -1.2
CLIP1-207ENST00000536634 IFT172Q9UG01 1749 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 TECPR2O15040 1411 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 F2P00734 622 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 ZNF888P0CJ79 500 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-207ENST00000536634 POLD1P28340 1107 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 FNTBP49356 437 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 DSG1Q02413 1049 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 KRT28Q7Z3Y7 464 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 ELF4Q99607 663 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-207ENST00000536634 KNDC1Q76NI1 1749 aa7.55□□□□□ -1.2
CLIP1-207ENST00000536634 A0A087X0B3 334 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 GSG1L2A8MUP6 293 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 B4GALT4O60513 344 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 GYS2P54840 703 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 ALDH6A1Q02252 535 aaKnown RBP7.54□□□□□ -1.2
CLIP1-207ENST00000536634 ESRP1Q6NXG1 681 aaKnown RBP7.54□□□□□ -1.2
CLIP1-207ENST00000536634 CXXC5Q7LFL8 322 aaKnown RBP7.54□□□□□ -1.2
CLIP1-207ENST00000536634 REXO1L1PQ8IX06 675 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 CHTF18Q8WVB6 975 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 CAMKK2Q96RR4 588 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 ACSS2Q9NR19 701 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 ADGRB2O60241 1585 aa7.54□□□□□ -1.2
CLIP1-207ENST00000536634 PLATP00750 562 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 SYN1P17600 705 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 KCNQ1P51787 676 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 ZNF174Q15697 407 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 RALYLQ86SE5 291 aaKnown RBP7.53□□□□□ -1.2
CLIP1-207ENST00000536634 KIF18BQ86Y91 864 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 PPM1KQ8N3J5 372 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 FOXB1Q99853 325 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 ZDHHC5Q9C0B5 715 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 THG1LQ9NWX6 298 aaKnown RBP7.53□□□□□ -1.2
CLIP1-207ENST00000536634 STK26Q9P289 416 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 ZKSCAN5Q9Y2L8 839 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 NRXN1Q9ULB1 1477 aa7.53□□□□□ -1.2
CLIP1-207ENST00000536634 COL14A1Q05707 1796 aaKnown RBP7.53□□□□□ -1.2
CLIP1-207ENST00000536634 TRPM3Q9HCF6 1732 aaPredicted RBP7.52□□□□□ -1.2
CLIP1-207ENST00000536634 SBNO1A3KN83 1393 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 PDE8AO60658 829 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 GAS7O60861 476 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 CUTAO60888 179 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 PRLP01236 227 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 ETV4P43268 484 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 RGS3P49796 1198 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 RRADP55042 308 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms