RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CHADLQ6NUI6 762 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 FAM114A1Q8IWE2 563 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 OR2W6PQ8NHA6 318 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 NOC3LQ8WTT2 800 aaKnown RBP23.24■■□□□ 1.31
TRIM3-214ENST00000536344 NDST4Q9H3R1 872 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 MMRN2Q9H8L6 949 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 PARP14Q460N5 1801 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 FAM13AO94988 1023 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 POTEJP0CG39 1038 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 CNTN2Q02246 1040 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 GUCY2DQ02846 1103 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 GPR162Q16538 588 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 TLDC1Q6P9B6 456 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 KCTD10Q9H3F6 313 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 GOLGA6L7A0A1B0GV03 622 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 IPO7O95373 1038 aaKnown RBP23.24■■□□□ 1.31
TRIM3-214ENST00000536344 NR3C2P08235 984 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 INHBEP58166 350 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 RNASE9P60153 205 aaKnown RBP23.24■■□□□ 1.31
TRIM3-214ENST00000536344 LRRC63Q05C16 580 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 ADAM9Q13443 819 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 BIRC2Q13490 618 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 TUFT1Q9NNX1 390 aa23.24■■□□□ 1.31
TRIM3-214ENST00000536344 CDC25CP30307 473 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 CRYMQ14894 314 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 EPHA7Q15375 998 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 VWA3BQ502W6 1294 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 COBLL1Q53SF7 1204 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 C1orf186Q6ZWK4 172 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 TEX13BQ9BXU2 312 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 DOCK5Q9H7D0 1870 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 CCNE2O96020 404 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 VAV2P52735 878 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 FKBP3Q00688 224 aaKnown RBP23.23■■□□□ 1.31
TRIM3-214ENST00000536344 SEMA3FQ13275 785 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 PPP2R3BQ9Y5P8 575 aa23.23■■□□□ 1.31
TRIM3-214ENST00000536344 PITPNM2Q9BZ72 1349 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 EME2A4GXA9 379 aaPredicted RBP23.22■■□□□ 1.31
TRIM3-214ENST00000536344 NR2F2P24468 414 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 PPP1R2P41236 205 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 PLA2G4FQ68DD2 849 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 B3GNT9Q6UX72 402 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 CDCA5Q96FF9 252 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 ATP6V1G3Q96LB4 118 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 C12orf42Q96LP6 360 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 TTYH3Q9C0H2 523 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 BTBD7Q9P203 1132 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 RBBP6Q7Z6E9 1792 aaKnown RBP23.22■■□□□ 1.31
TRIM3-214ENST00000536344 MKRN3Q13064 507 aaKnown RBP23.22■■□□□ 1.31
TRIM3-214ENST00000536344 ANKRD20A8PQ5CZ79 823 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 MAATS1Q7Z4T9 603 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 NACC1Q96RE7 527 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 RIT2Q99578 217 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 TCEAL9Q9UHQ7 104 aa23.22■■□□□ 1.31
TRIM3-214ENST00000536344 ARHGEF35A5YM69 484 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 A6NNZ2 444 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 HEXIM1O94992 359 aaKnown RBP23.21■■□□□ 1.31
TRIM3-214ENST00000536344 EPHX2P34913 555 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 NPEPPSP55786 919 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 PLCB4Q15147 1175 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 TUBB8Q3ZCM7 444 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 DPY19L2Q6NUT2 758 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 COL4A3BPQ9Y5P4 624 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 USO1O60763 962 aaKnown RBP23.21■■□□□ 1.31
TRIM3-214ENST00000536344 RGS20O76081 388 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 EZRP15311 586 aaKnown RBP23.21■■□□□ 1.31
TRIM3-214ENST00000536344 CASP4P49662 377 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 ZNF662Q6ZS27 426 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 GPRC5CQ9NQ84 441 aa23.21■■□□□ 1.31
TRIM3-214ENST00000536344 EEPD1Q7L9B9 569 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 PROCA1Q8NCQ7 364 aaPredicted RBP23.2■■□□□ 1.3
TRIM3-214ENST00000536344 TRIM58Q8NG06 486 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 HOXC10Q9NYD6 342 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 BUB1O43683 1085 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 GBP2P32456 591 aaPredicted RBP23.2■■□□□ 1.3
TRIM3-214ENST00000536344 SOX10P56693 466 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 BYSLQ13895 437 aaKnown RBP23.2■■□□□ 1.3
TRIM3-214ENST00000536344 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
TRIM3-214ENST00000536344 ANKRD35Q8N283 1001 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 IFIH1Q9BYX4 1025 aaKnown RBP23.2■■□□□ 1.3
TRIM3-214ENST00000536344 ADAMTS5Q9UNA0 930 aa23.2■■□□□ 1.3
TRIM3-214ENST00000536344 TACC1O75410 805 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 SCTRP47872 440 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 MAN2A1Q16706 1144 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 PADI6Q6TGC4 694 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 CCDC42Q96M95 316 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 ACAD9Q9H845 621 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 ZNHIT6Q9NWK9 470 aaKnown RBP23.19■■□□□ 1.3
TRIM3-214ENST00000536344 PLAAQ9Y263 795 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 KIAA1217Q5T5P2 1943 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 HIP1RO75146 1068 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 KNOP1Q1ED39 458 aaKnown RBP23.19■■□□□ 1.3
TRIM3-214ENST00000536344 ZNF572Q7Z3I7 529 aaPredicted RBP23.19■■□□□ 1.3
TRIM3-214ENST00000536344 VSIG10LQ86VR7 867 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 NCAPG2Q86XI2 1143 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 CASKIN2Q8WXE0 1202 aa23.19■■□□□ 1.3
TRIM3-214ENST00000536344 THOC1Q96FV9 657 aaKnown RBP23.19■■□□□ 1.3
TRIM3-214ENST00000536344 NLRC4Q9NPP4 1024 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms