RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DOCK5Q9H7D0 1870 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 ZNF862O60290 1169 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 PAFAH1B1P43034 410 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 PPP3CAQ08209 521 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 INTS8Q75QN2 995 aaKnown RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 C12orf56Q8IXR9 622 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 LNX1Q8TBB1 728 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 AENQ8WTP8 325 aaKnown RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 TIPINQ9BVW5 301 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 GOLPH3Q9H4A6 298 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 GABBR1Q9UBS5 961 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 AFG3L2Q9Y4W6 797 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 EMSYQ7Z589 1322 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 MAFGO15525 162 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 PHACTR2O75167 634 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 KRT13P13646 458 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 ANXA13P27216 316 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 VAMP7P51809 220 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 SOX10P56693 466 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 MRPS25P82663 173 aaKnown RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 VPS36Q86VN1 386 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 GSPT2Q8IYD1 628 aaKnown RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 XXYLT1Q8NBI6 393 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 SLC30A5Q8TAD4 765 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 PLEKHO2Q8TD55 490 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 SENP7Q9BQF6 1050 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 TEX13BQ9BXU2 312 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 RNF14Q9UBS8 474 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 RNF40O75150 1001 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 ARHGAP44Q17R89 818 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 DLK2Q6UY11 383 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 TMEM161BQ8NDZ6 487 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 RDM1Q8NG50 284 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 ACAD9Q9H845 621 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
VPS33B-202ENST00000535906 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
VPS33B-202ENST00000535906 CCDC169A6NNP5 214 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 SORBS3O60504 671 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 STBD1O95210 358 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 ADSSP30520 456 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 ACTN2P35609 894 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 NOP2P46087 812 aaKnown RBP14.52□□□□□ -0.08
VPS33B-202ENST00000535906 NPTX2P47972 431 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 GCLMP48507 274 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 SP4Q02446 784 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 CFAP221Q4G0U5 840 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 SWSAP1Q6NVH7 229 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 SYT11Q9BT88 431 aa14.52□□□□□ -0.08
VPS33B-202ENST00000535906 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 ANKRD63C9JTQ0 380 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 H2AFZP0C0S5 128 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 CAPN2P17655 700 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 H2AFVQ71UI9 128 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 LRRC57Q8N9N7 239 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.52□□□□□ -0.09
VPS33B-202ENST00000535906 BSNDQ8WZ55 320 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 CEP170P1Q96L14 293 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 FAM204AQ9H8W3 233 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 TBX20Q9UMR3 447 aa14.52□□□□□ -0.09
VPS33B-202ENST00000535906 FOXN3O00409 490 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 PEX10O60683 326 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 USP2O75604 605 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 SLC7A5Q01650 507 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 NOL9Q5SY16 702 aaKnown RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 GPC2Q8N158 579 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 JPH1Q9HDC5 661 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 STIM2Q9P246 746 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 PFASO15067 1338 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 ADRB2P07550 413 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 SMTNP53814 917 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 GALCP54803 685 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 DMP1Q13316 513 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 PTPROQ16827 1216 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 GLE1Q53GS7 698 aaKnown RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 ARHGEF19Q8IW93 802 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 CCDC60Q8IWA6 550 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 TPCN2Q8NHX9 752 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 IWS1Q96ST2 819 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 UBE2TQ9NPD8 197 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-202ENST00000535906 SLC9A2Q9UBY0 812 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
VPS33B-202ENST00000535906 FAM170AA1A519 330 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 DENND3A2RUS2 1198 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 TMCO5BA8MYB1 307 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 AGPSO00116 658 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 TNFRSF8P28908 595 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 CNGA1P29973 690 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms