RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 TMOD1P28289 359 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 CTNNB1P35222 781 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 RFC5P40937 340 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 PHKA2P46019 1235 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 TRAPPC10P48553 1259 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 MCM2P49736 904 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 POLGP54098 1239 aaPredicted RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 ERVFC1P60507 584 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 MBTD1Q05BQ5 628 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 HYAL1Q12794 435 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 ORC2Q13416 577 aaPredicted RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 PKP1Q13835 747 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 PDIA5Q14554 519 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 COL19A1Q14993 1142 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 TCEAL5Q5H9L2 206 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 HYIQ5T013 277 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 EEF1DP3Q658K8 133 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 LARP1BQ659C4 914 aaKnown RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 TAS1R3Q7RTX0 852 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 MRPL10Q7Z7H8 261 aaKnown RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 ZNF410Q86VK4 478 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 ZNF280BQ86YH2 543 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 IFNLR1Q8IU57 520 aaPredicted RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 TMEM130Q8N3G9 435 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 COLGALT1Q8NBJ5 622 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 RNF149Q8NC42 400 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 VN1R2Q8NFZ6 395 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 NEK9Q8TD19 979 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 KHSRPQ92945 711 aaKnown RBP eCLIP5.64□□□□□ -1.51
USH1C-210ENST00000534556 CHAMP1Q96JM3 812 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 PLIN2Q99541 437 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 MTRQ99707 1265 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 KIFC3Q9BVG8 833 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 RUSC1Q9BVN2 902 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 GCOM2Q9BZD3 368 aaPredicted RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 CCDC113Q9H0I3 377 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 POLR3FQ9H1D9 316 aaPredicted RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 ELAC1Q9H777 363 aaKnown RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 CD320Q9NPF0 282 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 AGPAT5Q9NUQ2 364 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 DDX19AQ9NUU7 478 aaKnown RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 TMEM161AQ9NX61 479 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 CACNG4Q9UBN1 327 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 DNAJB4Q9UDY4 337 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 LRWD1Q9UFC0 647 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 DBR1Q9UK59 544 aaKnown RBP5.64□□□□□ -1.51
USH1C-210ENST00000534556 PLAGL2Q9UPG8 496 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 KIAA1024Q9UPX6 916 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 HES2Q9Y543 173 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 PCDHB7Q9Y5E2 793 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 FRYLO94915 3013 aa5.64□□□□□ -1.51
USH1C-210ENST00000534556 A0A087X0B3 334 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 VPS37CA5D8V6 355 aaPredicted RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 VWA3AA6NCI4 1184 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 SFI1A8K8P3 1242 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 K7ELQ4 463 aaPredicted RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 ZNF623O75123 536 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 OFD1O75665 1012 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 DGAT1O75907 488 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 GLP2RO95838 553 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 XRCC6P12956 609 aaKnown RBP eCLIP5.63□□□□□ -1.51
USH1C-210ENST00000534556 ARF4P18085 180 aaPredicted RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 CYP11B2P19099 503 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 CCT6AP40227 531 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 PRPHP41219 470 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 DNM2P50570 870 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 SF3A1Q15459 793 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 CTC1Q2NKJ3 1217 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 TMEM119Q4V9L6 283 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 SPECC1Q5M775 1068 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 NT5DC1Q5TFE4 455 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 RINT1Q6NUQ1 792 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 PADI6Q6TGC4 694 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 C1orf186Q6ZWK4 172 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 OTUD6AQ7L8S5 288 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 CATSPER4Q7RTX7 472 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 SRGAP1Q7Z6B7 1085 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 RNF169Q8NCN4 708 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 GSTCDQ8NEC7 633 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 SNX29Q8TEQ0 813 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 POF1BQ8WVV4 589 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 PSPC1Q8WXF1 523 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 SLC7A3Q8WY07 619 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 SNX21Q969T3 373 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 MRPL38Q96DV4 380 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 TRAIPQ9BWF2 469 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 TMEM117Q9H0C3 514 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 NRDE2Q9H7Z3 1164 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 UPF2Q9HAU5 1272 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 ATP6V0A4Q9HBG4 840 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 C1orf112Q9NSG2 853 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 BLOC1S4Q9NUP1 217 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 FAM105AQ9NUU6 356 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 LMCD1Q9NZU5 365 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 THEGQ9P2T0 379 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 PIN4Q9Y237 131 aaKnown RBP5.63□□□□□ -1.51
USH1C-210ENST00000534556 ZDHHC9Q9Y397 364 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms