RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ADGRE1Q14246 886 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 PTPROQ16827 1216 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 NOTUMQ6P988 496 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 ZNF689Q96CS4 500 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-227ENST00000533909 PGBD4Q96DM1 585 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 DRC1Q96MC2 740 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 MMTAG2Q9BU76 263 aaKnown RBP14.81□□□□□ -0.04
CAPN1-227ENST00000533909 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-227ENST00000533909 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-227ENST00000533909 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 AAASQ9NRG9 546 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 KRT18P05783 430 aaKnown RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 PLA2G4BP0C869 781 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 AXLP30530 894 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 BMPR1AP36894 532 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 NAMPTP43490 491 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 MBTD1Q05BQ5 628 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 SKIV2LQ15477 1246 aaKnown RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 CCDC85BQ15834 202 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 FOXD4L6Q3SYB3 417 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 FOXD4L3Q6VB84 417 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 HACE1Q8IYU2 909 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 CCDC51Q96ER9 411 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 USP28Q96RU2 1077 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 NFKBIZQ9BYH8 718 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 RC3H2Q9HBD1 1191 aaKnown RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 FAM105AQ9NUU6 356 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 PRMT7Q9NVM4 692 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 CCDC39Q9UFE4 941 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 MRPL42Q9Y6G3 142 aaKnown RBP14.8□□□□□ -0.04
CAPN1-227ENST00000533909 TRANK1O15050 2925 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 CHD7Q9P2D1 2997 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 COL4A6Q14031 1691 aa14.8□□□□□ -0.04
CAPN1-227ENST00000533909 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 CCDC169A6NNP5 214 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 TSPAN1O60635 241 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 RB1P06400 928 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 EFNA5P52803 228 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 RAD51AP2Q09MP3 1159 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 DMP1Q13316 513 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 DHX8Q14562 1220 aaKnown RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 SLC39A14Q15043 492 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 PTPAQ15257 358 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 LONRF3Q496Y0 759 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 TMEM119Q4V9L6 283 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 HYIQ5T013 277 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 GLB1LQ6UWU2 654 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 KCNK18Q7Z418 384 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 IFNLR1Q8IU57 520 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 CRIPAKQ8N1N5 446 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 LRRC43Q8N309 656 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 KRI1Q8N9T8 703 aaKnown RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 HELQQ8TDG4 1101 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 PNMA5Q96PV4 448 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 RUSC1Q9BVN2 902 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 TIPINQ9BVW5 301 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 TRAIPQ9BWF2 469 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 PLVAPQ9BX97 442 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 MRPL9Q9BYD2 267 aaKnown RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 CSRNP2Q9H175 543 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 DAXXQ9UER7 740 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 PCDHB2Q9Y5E7 798 aa14.79□□□□□ -0.04
CAPN1-227ENST00000533909 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
CAPN1-227ENST00000533909 HIP1RO75146 1068 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 F13A1P00488 732 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 PLCG1P19174 1290 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 GRIN1Q05586 938 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 RNASELQ05823 741 aaKnown RBP14.78□□□□□ -0.04
CAPN1-227ENST00000533909 KARSQ15046 597 aaKnown RBP14.78□□□□□ -0.04
CAPN1-227ENST00000533909 MAPK6Q16659 721 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 RINT1Q6NUQ1 792 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 CNNM3Q8NE01 707 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 URGCPQ8TCY9 931 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 CLP1Q92989 425 aaKnown RBP14.78□□□□□ -0.04
CAPN1-227ENST00000533909 CPB2Q96IY4 423 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 PRIMPOLQ96LW4 560 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 LMCD1Q9NZU5 365 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 KCND2Q9NZV8 630 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 TFIP11Q9UBB9 837 aaKnown RBP14.78□□□□□ -0.04
CAPN1-227ENST00000533909 KCNG1Q9UIX4 513 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-227ENST00000533909 INPP5FQ9Y2H2 1132 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 MTCH2Q9Y6C9 303 aa14.78□□□□□ -0.04
CAPN1-227ENST00000533909 PRRC2BQ5JSZ5 2229 aaKnown RBP14.77□□□□□ -0.04
CAPN1-227ENST00000533909 PHLPP2Q6ZVD8 1323 aa14.77□□□□□ -0.04
CAPN1-227ENST00000533909 H3BNC9 293 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 SPTLC2O15270 562 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 PRKCBP05771 671 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 ITGA4P13612 1032 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 LAG3P18627 525 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 NASPP49321 788 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 SMTNP53814 917 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 PEX3P56589 373 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 PRPF4BQ13523 1007 aaKnown RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 CSPP1Q1MSJ5 1256 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms