RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 C17orf75Q9HAS0 396 aa12.07□□□□□ -0.48
CCDC90B-218ENST00000533761 PHF24Q9UPV7 400 aa12.07□□□□□ -0.48
CCDC90B-218ENST00000533761 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-218ENST00000533761 GOLGA6L6A8MZA4 724 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 CBFA2T2O43439 604 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 OATP04181 439 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 TPM2P07951 284 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 LRRC63Q05C16 580 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 GIT2Q14161 759 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 FAM114A1Q8IWE2 563 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 SLC7A3Q8WY07 619 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 PCYT2Q99447 389 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 NFE2L3Q9Y4A8 694 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 UBE4BO95155 1302 aa12.06□□□□□ -0.48
CCDC90B-218ENST00000533761 A0A1W2PQ45 241 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 A0A1W2PQY0 241 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 CCDC85CA6NKD9 419 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 H0YCG3 227 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 GAS2O43903 313 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MAPTP10636 758 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 RFC5P40937 340 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 PRCPP42785 496 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SMTNP53814 917 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 EHHADHQ08426 723 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 ARSHQ5FYA8 562 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 FAM178BQ8IXR5 827 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MYCT1Q8N699 235 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 KAT2BQ92831 832 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 RUSC1Q9BVN2 902 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SEZ6LQ9BYH1 1024 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 TRIM5Q9C035 493 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 ATP6V0A4Q9HBG4 840 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SLC39A2Q9NP94 309 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 STARD7Q9NQZ5 370 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 WRAP73Q9P2S5 460 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 A0A087WWV3 80 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SERPINC1P01008 464 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 CCNE1P24864 410 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 MARK3P27448 753 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 ZNF131P52739 623 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 POLGP54098 1239 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 RAD51AP2Q09MP3 1159 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 STK4Q13043 487 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 DMP1Q13316 513 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SMYD4Q8IYR2 804 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 C7orf31Q8N865 590 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 P2RX5Q93086 422 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 SENP6Q9GZR1 1112 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 CYP26B1Q9NR63 512 aa12.05□□□□□ -0.48
CCDC90B-218ENST00000533761 HAS3O00219 553 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 RTP1P59025 263 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 UGCGQ16739 394 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 FILIP1LQ4L180 1135 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 ANO5Q75V66 913 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 TRMT1LQ7Z2T5 733 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 GOLGA5Q8TBA6 731 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 TRIM44Q96DX7 344 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 NIFKQ9BYG3 293 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 C11orf49Q9H6J7 331 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 TOR4AQ9NXH8 423 aa12.04□□□□□ -0.48
CCDC90B-218ENST00000533761 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 ZNF862O60290 1169 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 HBP1O60381 514 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 HIP1RO75146 1068 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 GCNT3O95395 438 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 ADCY5O95622 1261 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 GNAT1P11488 350 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 COL6A1P12109 1028 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 PLS3P13797 630 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 RPL13P26373 211 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms