RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 RUSC1Q9BVN2 902 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 MYLK2Q9H1R3 596 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 PDZD7Q9H5P4 517 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 CNOT10Q9H9A5 744 aaKnown RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 PLAC1Q9HBJ0 212 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 AVENQ9NQS1 362 aaPredicted RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 MAP3K20Q9NYL2 800 aaKnown RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 WHRNQ9P202 907 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 GUCA1BQ9UMX6 200 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 MYPNQ86TC9 1320 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 GOLGA6CA6NDK9 693 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 O00370 1275 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 CCNT1O60563 726 aaKnown RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 PHF2O75151 1096 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 BBOX1O75936 387 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 GOLGA6DP0CG33 693 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 GBP1P32455 592 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 SOX5P35711 763 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 ARSEP51690 589 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 PSMC6P62333 389 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 KCNH2Q12809 1159 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 GRIK3Q13003 919 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 CNGA2Q16280 664 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 DDB1Q16531 1140 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 DACT2Q5SW24 774 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 FKBP15Q5T1M5 1219 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 SFMBT2Q5VUG0 894 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 FKBP1CQ5VVH2 108 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 PHLDB3Q6NSJ2 640 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 RINT1Q6NUQ1 792 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 SLC39A4Q6P5W5 647 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 BNIPLQ7Z465 357 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATM-221ENST00000533690 NIPA2Q8N8Q9 360 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 OR6Y1Q8NGX8 325 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 CLEC4DQ8WXI8 215 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 STAMQ92783 540 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 ARHGEF26Q96DR7 871 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 PCDHB18PQ96TA0 734 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 HERPUD2Q9BSE4 406 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 ROPN1BQ9BZX4 212 aaPredicted RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 ACBD3Q9H3P7 528 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 ROPN1Q9HAT0 212 aaPredicted RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 ARHGEF4Q9NR80 690 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 BMP2KQ9NSY1 1161 aaPredicted RBP4.28□□□□□ -1.72
ATM-221ENST00000533690 GOLGA6AQ9NYA3 693 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 CNTN3Q9P232 1028 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 LNPEPQ9UIQ6 1025 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 UBIAD1Q9Y5Z9 338 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 NUMBLQ9Y6R0 609 aa4.28□□□□□ -1.72
ATM-221ENST00000533690 IGKV6D-21A0A0A0MT36 114 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 POTEMA6NI47 508 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 MEIS1O00470 390 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 EVI5O60447 810 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 ENDOD1O94919 500 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 NR1D1P20393 614 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 SCP2P22307 547 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 PDE6BP35913 854 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 ELF3P78545 371 aaPredicted RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 CNTN2Q02246 1040 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 BTKQ06187 659 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 GRM1Q13255 1194 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 RAPGEF1Q13905 1077 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 PPP2R5EQ16537 467 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 CBWD6Q4V339 395 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 CBWD3Q5JTY5 395 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 CBWD5Q5RIA9 395 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 CDC42EP5Q6NZY7 148 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 SYDE1Q6ZW31 735 aaPredicted RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 ZNF804AQ7Z570 1209 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 DDX27Q96GQ7 796 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 TRIM47Q96LD4 638 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 RUNDC3BQ96NL0 473 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 PABPC3Q9H361 631 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 BCAS3Q9H6U6 928 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 FAM114A2Q9NRY5 505 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 PANK4Q9NVE7 773 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 DDX43Q9NXZ2 648 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 PPP1R9AQ9ULJ8 1098 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 PPME1Q9Y570 386 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 ANKRD63C9JTQ0 380 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 IRF6O14896 467 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 POLR3GO15318 223 aaPredicted RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 DNAJC6O75061 913 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 AGTP01019 485 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 LDHBP07195 334 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 ITGA4P13612 1032 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 HSPA6P17066 643 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 TECP42680 631 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 RPL34P49207 117 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 PPP2R2AP63151 447 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 MTMR3Q13615 1198 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 AUHQ13825 339 aaKnown RBP4.27□□□□□ -1.73
ATM-221ENST00000533690 SLMAPQ14BN4 828 aa4.27□□□□□ -1.73
ATM-221ENST00000533690 DLGAP5Q15398 846 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms