RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 GRIN2DO15399 1336 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 TPM4P67936 248 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 NFIL3Q16649 462 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 ZNF410Q86VK4 478 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 STAMQ92783 540 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 RNF208Q9H0X6 261 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 BMP6P22004 513 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 DNM2P50570 870 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 CDK7P50613 346 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 GTF2BQ00403 316 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 POLR3FQ9H1D9 316 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
CAPRIN1-215ENST00000533657 KLRC1P26715 233 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 TMOD1P28289 359 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 CASP1P29466 404 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 SERINC5Q86VE9 423 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 ADSSL1Q8N142 457 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 U2AF1L4Q8WU68 220 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 DHTKD1Q96HY7 919 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 MCOLN1Q9GZU1 580 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 RSPH10B2B2RC85 870 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 RSPH10BP0C881 870 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 TNNT1P13805 278 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 GLRA2P23416 452 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 PTK7Q13308 1070 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 DMP1Q13316 513 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 TFDP1Q14186 410 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 ZNF720Q7Z2F6 126 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
CAPRIN1-215ENST00000533657 A0A087WWV3 80 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 ARVCFO00192 962 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 PIGRP01833 764 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 EFNA5P52803 228 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 SMTNP53814 917 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 HIC1Q14526 733 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 FAM102BQ5T8I3 360 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 SRLQ86TD4 932 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 EVPLQ92817 2033 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 CLSTN1O94985 981 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 STIM1Q13586 685 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 ASAP3Q8TDY4 903 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
CAPRIN1-215ENST00000533657 IDEP14735 1019 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 NPTX2P47972 431 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 STK4Q13043 487 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 CAPSQ13938 189 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 FAM178BQ8IXR5 827 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 C12orf56Q8IXR9 622 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 KIAA0319LQ8IZA0 1049 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 MYCT1Q8N699 235 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 SQORQ9Y6N5 450 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 IKBKBO14920 756 aa11.28□□□□□ -0.6
CAPRIN1-215ENST00000533657 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms