RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 BUB1BO60566 1050 aaPredicted RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 KRT13P13646 458 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 C4orf19Q8IY42 314 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 ATG4CQ96DT6 458 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 HES6Q96HZ4 224 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 SH3GL2Q99962 352 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 UBE2TQ9NPD8 197 aaPredicted RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 SUCLA2Q9P2R7 463 aaPredicted RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 NFKBIEO00221 500 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 TMEM253P0C7T8 217 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 PPATQ06203 517 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 KIF22Q14807 665 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 C12orf56Q8IXR9 622 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 KAT5Q92993 513 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 THAP2Q9H0W7 228 aa16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA8IPA6NC78 632 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA8JA6NMD2 632 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ITGA4P13612 1032 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ADSSP30520 456 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 PSMC5P62195 406 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 TNNC1P63316 161 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ALCAMQ13740 583 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 BAATQ14032 418 aaPredicted RBP16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 EPC2Q52LR7 807 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ANO5Q75V66 913 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 XXYLT1Q8NBI6 393 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.256e-14■■■■■ 335.4
CACNA1E-208ENST00000533229 HACL1Q9UJ83 578 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 COG5Q9UP83 839 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ADRB2P07550 413 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 TNFAIP3P21580 790 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 NCKAP1LP55160 1127 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 XKR9Q5GH70 373 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 FAM102BQ5T8I3 360 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 RASGEF1CQ8N431 466 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ARL8AQ96BM9 186 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ZIM3Q96PE6 472 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 ST6GALNAC4Q9H4F1 302 aa16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 SEPT11Q9NVA2 429 aaKnown RBP16.63■□□□□ 0.25
CACNA1E-208ENST00000533229 NCANO14594 1321 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 ANKRD63C9JTQ0 380 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 PGRMC1O00264 195 aaKnown RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 ZBED4O75132 1171 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 ECHS1P30084 290 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 SOX10P56693 466 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 PAK2Q13177 524 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 NNTQ13423 1086 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 FOXR1Q6PIV2 292 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 SYCE1Q8N0S2 351 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 ZKSCAN4Q969J2 545 aaPredicted RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 AGPAT1Q99943 283 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 TMEM117Q9H0C3 514 aa16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 DDX47Q9H0S4 455 aaKnown RBP16.62■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 WDR64B1ANS9 1081 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 TTMPQ5BVD1 217 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 LRRC31Q6UY01 552 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 CBWD2Q8IUF1 395 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 IQCKQ8N0W5 287 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 TMEM161BQ8NDZ6 487 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 CTDP1Q9Y5B0 961 aaPredicted RBP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 DDX3YO15523 660 aaKnown RBP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 KRT14P02533 472 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 CCDC172P0C7W6 258 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 JAK3P52333 1124 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 BACE1P56817 501 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 ALS2CLQ60I27 953 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 VSIG10LQ86VR7 867 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms