RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ZBTB39O15060 712 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 CSPG5O95196 566 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 SRGAP2CP0DJJ0 459 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 GTF2F1P35269 517 aaKnown RBP eCLIP26.13■■□□□ 1.77
SMPD1-209ENST00000533196 TRAPPC10P48553 1259 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 KRT17Q04695 432 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 POU5F1BQ06416 359 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 ADGRD2Q7Z7M1 963 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 GJD3Q8N144 294 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 HELQQ8TDG4 1101 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 PGBD4Q96DM1 585 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 CCDC43Q96MW1 224 aaKnown RBP26.13■■□□□ 1.77
SMPD1-209ENST00000533196 TMEM60Q9H2L4 133 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 XPNPEP1Q9NQW7 623 aa26.13■■□□□ 1.77
SMPD1-209ENST00000533196 TBX10O75333 385 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 MCM7P33993 719 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 TFDP1Q14186 410 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 RNF149Q8NC42 400 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 TLE6Q9H808 572 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 TUFT1Q9NNX1 390 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 SPG21Q9NZD8 308 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 CD207Q9UJ71 328 aa26.12■■□□□ 1.77
SMPD1-209ENST00000533196 ATP2B1P20020 1258 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 NRIP1P48552 1158 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 RARRES1P49788 294 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 NDUFV1P49821 464 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 ERVFC1P60507 584 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 DLX2Q07687 328 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 SMAD4Q13485 552 aaKnown RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 GNL2Q13823 731 aaKnown RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 GLB1LQ6UWU2 654 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 IFNLR1Q8IU57 520 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 NOSTRINQ8IVI9 506 aa26.11■■□□□ 1.77
SMPD1-209ENST00000533196 NGRNQ9NPE2 291 aaKnown RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 BMP2KQ9NSY1 1161 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-209ENST00000533196 POTEMA6NI47 508 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 LINC01565O15544 149 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 MBTPS2O43462 519 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 ST18O60284 1047 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 OR52Z1P0C646 297 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 AXLP30530 894 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 ALDH7A1P49419 539 aaKnown RBP26.1■■□□□ 1.77
SMPD1-209ENST00000533196 PTENP60484 403 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 SMAD2Q15796 467 aaKnown RBP26.1■■□□□ 1.77
SMPD1-209ENST00000533196 SLC39A11Q8N1S5 342 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 ERMNQ8TAM6 284 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 MSLNLQ96KJ4 702 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 POLR3CQ9BUI4 534 aaPredicted RBP26.1■■□□□ 1.77
SMPD1-209ENST00000533196 MINDY3Q9H8M7 445 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 NOL7Q9UMY1 257 aaKnown RBP26.1■■□□□ 1.77
SMPD1-209ENST00000533196 KIF3AQ9Y496 699 aa26.1■■□□□ 1.77
SMPD1-209ENST00000533196 EYA4O95677 639 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 COASYQ13057 564 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 MRPL10Q7Z7H8 261 aaKnown RBP26.09■■□□□ 1.77
SMPD1-209ENST00000533196 CNNM3Q8NE01 707 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 CCDC51Q96ER9 411 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 NFKBIZQ9BYH8 718 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 CD320Q9NPF0 282 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 PCDHB2Q9Y5E7 798 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 CNTNAP2Q9UHC6 1331 aa26.09■■□□□ 1.77
SMPD1-209ENST00000533196 ERLIN2O94905 339 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 SPATA31C1P0DKV0 1188 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 MUTP22033 750 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 HOXA11P31270 313 aaPredicted RBP26.08■■□□□ 1.77
SMPD1-209ENST00000533196 ARL2P36404 184 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 NCBP1Q09161 790 aaKnown RBP26.08■■□□□ 1.77
SMPD1-209ENST00000533196 DUSP6Q16828 381 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 NOMO2Q5JPE7 1267 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 TTC38Q5R3I4 469 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 RBM23Q86U06 439 aaKnown RBP26.08■■□□□ 1.77
SMPD1-209ENST00000533196 ADHFE1Q8IWW8 467 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 NACC1Q96RE7 527 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 TCF25Q9BQ70 676 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 UPF2Q9HAU5 1272 aaKnown RBP26.08■■□□□ 1.77
SMPD1-209ENST00000533196 CLEC1BQ9P126 229 aa26.08■■□□□ 1.77
SMPD1-209ENST00000533196 DBR1Q9UK59 544 aaKnown RBP26.08■■□□□ 1.77
SMPD1-209ENST00000533196 OFD1O75665 1012 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 SRGAP2BP0DMP2 458 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 U2AF2P26368 475 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMPD1-209ENST00000533196 SSTR3P32745 418 aaPredicted RBP26.07■■□□□ 1.76
SMPD1-209ENST00000533196 ZP2Q05996 745 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 BMS1Q14692 1282 aaKnown RBP26.07■■□□□ 1.76
SMPD1-209ENST00000533196 ZNF174Q15697 407 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 CATSPER3Q86XQ3 398 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 PIGOQ8TEQ8 1089 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 LPPQ93052 612 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 POP1Q99575 1024 aaKnown RBP26.07■■□□□ 1.76
SMPD1-209ENST00000533196 ENTPD7Q9NQZ7 604 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 TBC1D13Q9NVG8 400 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 PCDHGC5Q9Y5F6 944 aa26.07■■□□□ 1.76
SMPD1-209ENST00000533196 C19orf67A6NJJ6 358 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 PI4K2BG5E9Z4 385 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 RPA1P27694 616 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 TECP42680 631 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 BCAR1P56945 870 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 TMEM184AQ6ZMB5 413 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 MCPH1Q8NEM0 835 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 TMEM169Q96HH4 297 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 EPHX3Q9H6B9 360 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 UBN1Q9NPG3 1134 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms