RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GNAQP50148 359 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 DSC3Q14574 896 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 TMTC3Q6ZXV5 915 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 KIAA0319LQ8IZA0 1049 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 CMTR1Q8N1G2 835 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 STAMQ92783 540 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 PHKBQ93100 1093 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 PKD2L1Q9P0L9 805 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 DENND4AQ7Z401 1863 aa12.75□□□□□ -0.37
TRAPPC4-213ENST00000533149 FANCMQ8IYD8 2048 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 CYTH3O43739 400 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 STX6O43752 255 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 CTSAP10619 480 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 BCAR1P56945 870 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 FUT2Q10981 343 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 SLC44A3Q8N4M1 653 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 ARHGEF3Q9NR81 526 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 RNF19AQ9NV58 838 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 PCDHGA2Q9Y5H1 932 aa12.74□□□□□ -0.37
TRAPPC4-213ENST00000533149 MEIS2O14770 477 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 HBP1O60381 514 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 GBP2P32456 591 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 SLC35G1Q2M3R5 365 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 RSAD2Q8WXG1 361 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 SHDQ96IW2 340 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 OSMRQ99650 979 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 LZTS2Q9BRK4 669 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 ZFHX4Q86UP3 3567 aa12.73□□□□□ -0.37
TRAPPC4-213ENST00000533149 COL1A2P08123 1366 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 NT5C1B-RDH14C9J2C7 533 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 FOSBP53539 338 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 ACTR2P61160 394 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 COL9A2Q14055 689 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 KIZQ2M2Z5 673 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 CLLU1OSQ5K130 101 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 MAML2Q8IZL2 1156 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 AIFM3Q96NN9 605 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
TRAPPC4-213ENST00000533149 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 VPS37CA5D8V6 355 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 POTEMA6NI47 508 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 H3BQV1 296 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 KLRC2P26717 231 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 DMWDQ09019 674 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 ZNF484Q5JVG2 852 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 WASF1Q92558 559 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 C8orf76Q96K31 380 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
TRAPPC4-213ENST00000533149 NFASCO94856 1347 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZC3H11AO75152 810 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 996.2 ms