RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 NCANO14594 1321 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 MYO3BQ8WXR4 1341 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 C5orf60A6NFR6 353 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 DDX3XO00571 662 aaKnown RBP eCLIP10.11□□□□□ -0.79
BDNF-216ENST00000532997 MED24O75448 989 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 ACSL3O95573 720 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 CFBP00751 764 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 KRT15P19012 456 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 DRD4P21917 467 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 GSCP56915 257 aaPredicted RBP10.11□□□□□ -0.79
BDNF-216ENST00000532997 ZBTB16Q05516 673 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 XRCC4Q13426 336 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
BDNF-216ENST00000532997 SYDE2Q5VT97 1194 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 RNF207Q6ZRF8 634 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 SPATA21Q7Z572 469 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 CATSPER3Q86XQ3 398 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 PPFIBP2Q8ND30 876 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 HES6Q96HZ4 224 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 EIF2AK1Q9BQI3 630 aaKnown RBP10.11□□□□□ -0.79
BDNF-216ENST00000532997 TMOD4Q9NZQ9 345 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
BDNF-216ENST00000532997 BCORQ6W2J9 1755 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 COL1A1P02452 1464 aaPredicted RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 AKAP3O75969 853 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 POLR2MP0CAP2 368 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 RNASELQ05823 741 aaKnown RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 TTBK2Q6IQ55 1244 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 C11orf63Q6NUN7 778 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 TXNRD3Q86VQ6 643 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 NT5C1BQ96P26 610 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 SERPINB12Q96P63 405 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 VCXQ9H320 206 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 KCND2Q9NZV8 630 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 SLC12A6Q9UHW9 1150 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 RASSF9O75901 435 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 ATP6V1G2O95670 118 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 TROVE2P10155 538 aaKnown RBP eCLIP10.1□□□□□ -0.79
BDNF-216ENST00000532997 MAPK4P31152 587 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 SLC8A3P57103 927 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 RPUSD2Q8IZ73 545 aaKnown RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 FBXO25Q8TCJ0 367 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 SLC35C1Q96A29 364 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 OLFML3Q9NRN5 406 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 FRMD3A2A2Y4 597 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 O00370 1275 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 P4HA2O15460 535 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 BRAFP15056 766 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 ATP2A2P16615 1042 aaKnown RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 FGFR4P22455 802 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 PDE6BP35913 854 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 TRADDQ15628 312 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 AOC3Q16853 763 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 WDR44Q5JSH3 913 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 CCDC89Q8N998 374 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 ZNF564Q8TBZ8 553 aaPredicted RBP10.1□□□□□ -0.79
BDNF-216ENST00000532997 LRRC8CQ8TDW0 803 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 PIK3R5Q8WYR1 880 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 HAS1Q92839 578 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 GLG1Q92896 1179 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.79
BDNF-216ENST00000532997 CFAP57Q96MR6 1250 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 ZSWIM1Q9BR11 485 aa10.1□□□□□ -0.79
BDNF-216ENST00000532997 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 TCP11X1B4DZS4 312 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 MAPK13O15264 365 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 DCTN3O75935 186 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 ITIH2P19823 946 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 BPIFB4P59827 614 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 CTTNQ14247 550 aaKnown RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 MIER3Q7Z3K6 550 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 BICD1Q96G01 975 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 SNF8Q96H20 258 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 PITPNM3Q9BZ71 974 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 COA1Q9GZY4 146 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 SPATS2LQ9NUQ6 558 aaKnown RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 UVRAGQ9P2Y5 699 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 MRPL11Q9Y3B7 192 aaKnown RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 SFI1A8K8P3 1242 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 HGSO14964 777 aaPredicted RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 BMP3P12645 472 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 PRELPP51888 382 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 TAF11Q15544 211 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 PPP1R2P3Q6NXS1 205 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 OTUD6AQ7L8S5 288 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 FBXO41Q8TF61 875 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 LRRC15Q8TF66 581 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 FAM163AQ96GL9 167 aaPredicted RBP10.09□□□□□ -0.79
BDNF-216ENST00000532997 DAGLAQ9Y4D2 1042 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 TRIM49P0CI25 452 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 TRIM49CP0CI26 452 aa10.09□□□□□ -0.79
BDNF-216ENST00000532997 NQO1P15559 274 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms