RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 POLIQ9UNA4 740 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 CTNND1O60716 968 aaKnown RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PRCPP42785 496 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 EPHA7Q15375 998 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 TKFCQ3LXA3 575 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 SZRD1Q7Z422 152 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 CALN1Q9BXU9 219 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 ZSCAN32Q9NX65 697 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 CIITAP33076 1130 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 TGFB2P61812 414 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 ATP2C1P98194 919 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PDE1BQ01064 536 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 VSTM4Q8IW00 320 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 MYRIPQ8NFW9 859 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 SYNDIG1Q9H7V2 258 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 CDV3Q9UKY7 258 aaKnown RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF263O14978 683 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 BNIP3LO60238 219 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PRPSAP2O60256 369 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 STAT5BP51692 787 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 C16orf72Q14CZ0 275 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 KNOP1Q1ED39 458 aaKnown RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 SLC10A5Q5PT55 438 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 SYTL2Q9HCH5 934 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 RRAGDQ9NQL2 400 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PPP1R9AQ9ULJ8 1098 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PXDNQ92626 1479 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PROM2Q8N271 834 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 KCTD6Q8NC69 237 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 OGFRQ9NZT2 677 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 SEL1LQ9UBV2 794 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 DNAJC12Q9UKB3 198 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
CTNND1-232ENST00000532649 HUS1O60921 280 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 MOCS3O95396 460 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 GGPS1O95749 300 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 SRGNP10124 158 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 CETPP11597 493 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 CYP2B6P20813 491 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 YWHABP31946 246 aaKnown RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 WASHC5Q12768 1159 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 SNX1Q13596 522 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 GIPC2Q8TF65 315 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 ZC4H2Q9NQZ6 224 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 HIP1RO75146 1068 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 FTCDO95954 541 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 ACTN1P12814 892 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 LMNB2Q03252 620 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 YWHAHQ04917 246 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 CDO1Q16878 200 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 UHMK1Q8TAS1 419 aaKnown RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 RUNDC3BQ96NL0 473 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 HINFPQ9BQA5 517 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 RGL1Q9NZL6 768 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 ARHGEF28Q8N1W1 1705 aaKnown RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 TMCC1O94876 653 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 CHEK2O96017 543 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 ZC3H12BQ5HYM0 836 aaKnown RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 SAAL1Q96ER3 474 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 MCF2LO15068 1137 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 C10orf76Q5T2E6 689 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM15Q9C019 465 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 PCDHA13Q9Y5I0 950 aa9.33□□□□□ -0.92
CTNND1-232ENST00000532649 LRRD1A4D1F6 860 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 INHBAP08476 426 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 GLE1Q53GS7 698 aaKnown RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 YAF2Q8IY57 180 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 NUDCD1Q96RS6 583 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 TUFT1Q9NNX1 390 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 PRDM5Q9NQX1 630 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 SLIT1O75093 1534 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 VAMP7P51809 220 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 GUCY2DQ02846 1103 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms