RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 POU3F3P20264 500 aaPredicted RBP19.31■□□□□ 0.68
CTSB-223ENST00000532370 POU5F1BQ06416 359 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 PKP1Q13835 747 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 CLLU1OSQ5K130 101 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 CABP7Q86V35 215 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 IFNLR1Q8IU57 520 aaPredicted RBP19.31■□□□□ 0.68
CTSB-223ENST00000532370 LRRC15Q8TF66 581 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 LPPQ93052 612 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 CPB2Q96IY4 423 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 SAMD11Q96NU1 681 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 CASD1Q96PB1 797 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 USP28Q96RU2 1077 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 ZSCAN16Q9H4T2 348 aaPredicted RBP19.31■□□□□ 0.68
CTSB-223ENST00000532370 PRDM6Q9NQX0 595 aa19.31■□□□□ 0.68
CTSB-223ENST00000532370 MEIS3P2A8K0S8 358 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 H3BNC9 293 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 B4GALT5O43286 388 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 GPM6BQ13491 265 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 AMHR2Q16671 573 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 TMEM119Q4V9L6 283 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 SPECC1Q5M775 1068 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 UBXN11Q5T124 520 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 LRRC55Q6ZSA7 311 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 AK8Q96MA6 479 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 TRAIPQ9BWF2 469 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 NFKBIZQ9BYH8 718 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 FAM105AQ9NUU6 356 aa19.3■□□□□ 0.68
CTSB-223ENST00000532370 TYW1Q9NV66 732 aaKnown RBP19.3■□□□□ 0.68
CTSB-223ENST00000532370 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
CTSB-223ENST00000532370 LOXHD1Q8IVV2 1947 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 C5orf67F2Z3F1 127 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 ERLIN2O94905 339 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 EOMESO95936 686 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 SSBP05455 408 aaKnown RBP eCLIP19.29■□□□□ 0.68
CTSB-223ENST00000532370 LONP1P36776 959 aaKnown RBP19.29■□□□□ 0.68
CTSB-223ENST00000532370 UBA7P41226 1012 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 RINT1Q6NUQ1 792 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 DAW1Q8N136 415 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 HELQQ8TDG4 1101 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 TMEM117Q9H0C3 514 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 CSRNP2Q9H175 543 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 FBXO2Q9UK22 296 aaPredicted RBP19.29■□□□□ 0.68
CTSB-223ENST00000532370 USP20Q9Y2K6 914 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 PCDHB2Q9Y5E7 798 aa19.29■□□□□ 0.68
CTSB-223ENST00000532370 TTLL13PA6NNM8 815 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 GRM6O15303 877 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 RAD51AP2Q09MP3 1159 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 KARSQ15046 597 aaKnown RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 FOXD4L6Q3SYB3 417 aaPredicted RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 CDCA2Q69YH5 1023 aaPredicted RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 FOXD4L3Q6VB84 417 aaPredicted RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 SLC17A8Q8NDX2 589 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 EPSTI1Q96J88 318 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 EIF2AQ9BY44 585 aaKnown RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 CWH43Q9H720 699 aa19.28■□□□□ 0.68
CTSB-223ENST00000532370 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 TFIP11Q9UBB9 837 aaKnown RBP19.28■□□□□ 0.68
CTSB-223ENST00000532370 PRRC2BQ5JSZ5 2229 aaKnown RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 SFI1A8K8P3 1242 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 HOXA2O43364 376 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 ZNF623O75123 536 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 HIP1RO75146 1068 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 CSPG5O95196 566 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 RB1P06400 928 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 PLA2G4BP0C869 781 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 ARF4P18085 180 aaPredicted RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 SLC12A3P55017 1021 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 SLC39A14Q15043 492 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 SPOUT1Q5T280 376 aaKnown RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 CDR2LQ86X02 465 aaPredicted RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 ABI1Q8IZP0 508 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 KLHL23Q8NBE8 558 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 RWDD3Q9Y3V2 267 aa19.27■□□□□ 0.68
CTSB-223ENST00000532370 SRPRBQ9Y5M8 271 aaKnown RBP19.27■□□□□ 0.68
CTSB-223ENST00000532370 NPHP3-ACAD11A0A0J9YXS1 232 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 LIG1P18858 919 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 PLCG1P19174 1290 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 NAMPTP43490 491 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 RAB27AP51159 221 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 MAPK7Q13164 816 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 PCBP1Q15365 356 aaKnown RBP eCLIP19.26■□□□□ 0.67
CTSB-223ENST00000532370 MRPL10Q7Z7H8 261 aaKnown RBP19.26■□□□□ 0.67
CTSB-223ENST00000532370 SYT2Q8N9I0 419 aaPredicted RBP19.26■□□□□ 0.67
CTSB-223ENST00000532370 SMG8Q8ND04 991 aaKnown RBP19.26■□□□□ 0.67
CTSB-223ENST00000532370 DEPTORQ8TB45 409 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 MRPL38Q96DV4 380 aaKnown RBP19.26■□□□□ 0.67
CTSB-223ENST00000532370 CALML4Q96GE6 196 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 C11orf84Q9BUA3 381 aaPredicted RBP19.26■□□□□ 0.67
CTSB-223ENST00000532370 PLVAPQ9BX97 442 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 FZD8Q9H461 694 aa19.26■□□□□ 0.67
CTSB-223ENST00000532370 BLOC1S4Q9NUP1 217 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms