RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 PDLIM7Q9NR12 457 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 KRT13P13646 458 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 H2AFXP16104 143 aaPredicted RBP16.56■□□□□ 0.24
SRPRA-206ENST00000532259 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 SLC39A4Q6P5W5 647 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 SLC9A9Q8IVB4 645 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 CEP112Q8N8E3 955 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 ZC3H15Q8WU90 426 aaKnown RBP16.56■□□□□ 0.24
SRPRA-206ENST00000532259 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
SRPRA-206ENST00000532259 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 CCDC94Q9BW85 323 aaPredicted RBP16.56■□□□□ 0.24
SRPRA-206ENST00000532259 PARD6BQ9BYG5 372 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 INTS2Q9H0H0 1204 aaKnown RBP16.56■□□□□ 0.24
SRPRA-206ENST00000532259 PORCNQ9H237 461 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 MCM3APO60318 1980 aa16.56■□□□□ 0.24
SRPRA-206ENST00000532259 GSTTP1A0A1W2PQM5 241 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 STAM2O75886 525 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-206ENST00000532259 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 EDNRBP24530 442 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 KLRC1P26715 233 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 SMTNP53814 917 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 HINFPQ9BQA5 517 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 ZNF302Q9NR11 478 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 SMARCAL1Q9NZC9 954 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 FBXO40Q9UH90 709 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 DNAJC12Q9UKB3 198 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 TACC1O75410 805 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 MAPTP10636 758 aaKnown RBP16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CNGA1P29973 690 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 ICAM3P32942 547 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 VAMP7P51809 220 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 TAS1R3Q7RTX0 852 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 POLR3FQ9H1D9 316 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-206ENST00000532259 EHD2Q9NZN4 543 aa16.55■□□□□ 0.24
SRPRA-206ENST00000532259 MARK3P27448 753 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 POLGP54098 1239 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-206ENST00000532259 JAM2P57087 298 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 DRAP1Q14919 205 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-206ENST00000532259 PHLDB3Q6NSJ2 640 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 NFRKBQ6P4R8 1299 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 BICD1Q96G01 975 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 GOLPH3Q9H4A6 298 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 PACSIN2Q9UNF0 486 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-206ENST00000532259 MAFBQ9Y5Q3 323 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-206ENST00000532259 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 GGPS1O95749 300 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 LMO3Q8TAP4 145 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 COPS5Q92905 334 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
SRPRA-206ENST00000532259 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-206ENST00000532259 GTPBP10A4D1E9 387 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 RBAK-RBAKDNI3L0D1 243 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 HNRNPDLO14979 420 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 EVI5O60447 810 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 DGAT1O75907 488 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 ATG7O95352 703 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 FTCDO95954 541 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 DRP2Q13474 957 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 XKR3Q5GH77 459 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 ARMC9Q7Z3E5 817 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 TRIM58Q8NG06 486 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 COG1Q8WTW3 980 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 PNKPQ96T60 521 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 GPR88Q9GZN0 384 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 PDE2AO00408 941 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 OATP04181 439 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 MRPS25P82663 173 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 EMC2Q15006 297 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 PPP2R5AQ15172 486 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 SNRNP35Q16560 246 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 LDLRAD1Q5T700 205 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 PAPD7Q5XG87 772 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 MAP4K3Q8IVH8 894 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 GPR161Q8N6U8 529 aaKnown RBP16.53■□□□□ 0.24
SRPRA-206ENST00000532259 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 KIFAP3Q92845 792 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms