RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RWDD3Q9Y3V2 267 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 SRPRBQ9Y5M8 271 aaKnown RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 CLIC4Q9Y696 253 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 ADGRA3Q8IWK6 1321 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 ARHGEF35A5YM69 484 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 HOXA2O43364 376 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 USO1O60763 962 aaKnown RBP11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 CSDE1O75534 798 aaKnown RBP11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 RB1P06400 928 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 SKIP12755 728 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 AXLP30530 894 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 AMHR2Q16671 573 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 PTPROQ16827 1216 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 FAM173BQ6P4H8 233 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 C1orf186Q6ZWK4 172 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 ECHDC2Q86YB7 292 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 KIFAP3Q92845 792 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 KCNN1Q92952 543 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 CCDC51Q96ER9 411 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 ZNF668Q96K58 619 aaPredicted RBP11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 PRIMPOLQ96LW4 560 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 USP28Q96RU2 1077 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 C17orf80Q9BSJ5 609 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 TIPINQ9BVW5 301 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 C17orf75Q9HAS0 396 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 FBXO2Q9UK22 296 aaPredicted RBP11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 MYH11P35749 1972 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 NCOR1O75376 2440 aa11.99□□□□□ -0.49
GPATCH4-216ENST00000531900 E9PMD0 336 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 BMP1P13497 986 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 FGFR4P22455 802 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 GUCY2CP25092 1073 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 UBA7P41226 1012 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 NAMPTP43490 491 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 RAB27AP51159 221 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 TFF2Q03403 129 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 MBTD1Q05BQ5 628 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 EPC2Q52LR7 807 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 NAALADL2Q58DX5 795 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 RINT1Q6NUQ1 792 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 CATSPER4Q7RTX7 472 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 MRPL10Q7Z7H8 261 aaKnown RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 CABP7Q86V35 215 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 TMEM192Q8IY95 271 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 FIBCD1Q8N539 461 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 NTPCRQ9BSD7 190 aaKnown RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 PLVAPQ9BX97 442 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 POLR3FQ9H1D9 316 aaPredicted RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 FZD8Q9H461 694 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 GPRC5CQ9NQ84 441 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 RNF19AQ9NV58 838 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 LRFN2Q9ULH4 789 aa11.98□□□□□ -0.49
GPATCH4-216ENST00000531900 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 H3BNC9 293 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 PPP6R2O75170 966 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 F13A1P00488 732 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 BMPR1AP36894 532 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 SLC12A3P55017 1021 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 GRIN1Q05586 938 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 BTG3Q14201 252 aaPredicted RBP11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 PPP2R5AQ15172 486 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 DAW1Q8N136 415 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 LINC00301Q8NCQ3 95 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 CNNM3Q8NE01 707 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 P2RX5Q93086 422 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 MRPL38Q96DV4 380 aaKnown RBP11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 CALML4Q96GE6 196 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 ZNF396Q96N95 335 aaPredicted RBP11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 TMEM117Q9H0C3 514 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 C2orf40Q9H1Z8 148 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 FAM105AQ9NUU6 356 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
GPATCH4-216ENST00000531900 INPPL1O15357 1258 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 TSPAN1O60635 241 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 YEATS4O95619 227 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 BRD1O95696 1058 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 PLA2G4BP0C869 781 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 KCNQ1P51787 676 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 EFNA5P52803 228 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 NCBP1Q09161 790 aaKnown RBP11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 MAPK7Q13164 816 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 GPM6BQ13491 265 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 UBXN11Q5T124 520 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 BSNDQ8WZ55 320 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 CASD1Q96PB1 797 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms