RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 PTPN14Q15678 1187 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 CCDC149Q6ZUS6 474 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 ERMP1Q7Z2K6 904 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 GPR149Q86SP6 731 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 CCDC105Q8IYK2 499 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 ACSF2Q96CM8 615 aaPredicted RBP20.28■□□□□ 0.84
SCN4B-205ENST00000531550 TRAIPQ9BWF2 469 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 GCOM2Q9BZD3 368 aaPredicted RBP20.28■□□□□ 0.84
SCN4B-205ENST00000531550 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 TBC1D13Q9NVG8 400 aa20.28■□□□□ 0.84
SCN4B-205ENST00000531550 GALTP07902 379 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 ID4P47928 161 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 TDGQ13569 410 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 TARBP2Q15633 366 aaKnown RBP20.27■□□□□ 0.84
SCN4B-205ENST00000531550 LONRF3Q496Y0 759 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 NOMO2Q5JPE7 1267 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 TWF2Q6IBS0 349 aaKnown RBP20.27■□□□□ 0.84
SCN4B-205ENST00000531550 GLB1LQ6UWU2 654 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 OTOP3Q7RTS5 596 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.84
SCN4B-205ENST00000531550 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 DUSP12Q9UNI6 340 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 INPP5FQ9Y2H2 1132 aa20.27■□□□□ 0.84
SCN4B-205ENST00000531550 PTPRZ1P23471 2315 aaPredicted RBP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 SPTBN4Q9H254 2564 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 MEIS3P2A8K0S8 358 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 MSH4O15457 936 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 CHMP2AO43633 222 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 CD2BP2O95400 341 aaKnown RBP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 SLC11A1P49279 550 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 AK2P54819 239 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 BECN1Q14457 450 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 ANGPT1Q15389 498 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 Q6ZUG5 572 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 DNAJB4Q9UDY4 337 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 PIN4Q9Y237 131 aaKnown RBP20.26■□□□□ 0.83
SCN4B-205ENST00000531550 C2orf16Q68DN1 1984 aa20.26■□□□□ 0.83
SCN4B-205ENST00000531550 A0A087WZ62 844 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 SKIP12755 728 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 GNA11P29992 359 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 SFNP31947 248 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 CLCN4P51793 760 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 JAK3P52333 1124 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 CDC42EP1Q00587 391 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
SCN4B-205ENST00000531550 TOB2Q14106 344 aaPredicted RBP20.25■□□□□ 0.83
SCN4B-205ENST00000531550 MTERF2Q49AM1 385 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 RIT2Q99578 217 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 RTP3Q9BQQ7 232 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 FDXACB1Q9BRP7 624 aaPredicted RBP20.25■□□□□ 0.83
SCN4B-205ENST00000531550 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 UNC45AQ9H3U1 944 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 KCNK12Q9HB15 430 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 FAM105AQ9NUU6 356 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
SCN4B-205ENST00000531550 FBXL21Q9UKT6 434 aa20.25■□□□□ 0.83
SCN4B-205ENST00000531550 FAM186AA6NE01 2351 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 EDIL3O43854 480 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 B4GALT3O60512 393 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 GAS7O60861 476 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 OFD1O75665 1012 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 HSCBQ8IWL3 235 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 SIX5Q8N196 739 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 DTWD2Q8NBA8 298 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 KLHL5Q96PQ7 755 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 CEP89Q96ST8 783 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 TEKT3Q9BXF9 490 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 LIMCH1Q9UPQ0 1083 aa20.24■□□□□ 0.83
SCN4B-205ENST00000531550 IGKV6-21A0A0C4DH24 114 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 TMEM150BA6NC51 233 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 KLRC2P26717 231 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 RAB27AP51159 221 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 EVCP57679 992 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 FGD1P98174 961 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 LETM2Q2VYF4 491 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 LRCH2Q5VUJ6 765 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 C15orf39Q6ZRI6 1047 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 ZNF410Q86VK4 478 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 ZNF280BQ86YH2 543 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 GJA10Q969M2 543 aa20.23■□□□□ 0.83
SCN4B-205ENST00000531550 NIFKQ9BYG3 293 aaKnown RBP20.23■□□□□ 0.83
SCN4B-205ENST00000531550 K7ELQ4 463 aaPredicted RBP20.22■□□□□ 0.83
SCN4B-205ENST00000531550 ZNF623O75123 536 aa20.22■□□□□ 0.83
SCN4B-205ENST00000531550 SSBP05455 408 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCN4B-205ENST00000531550 CNPP09543 421 aaKnown RBP20.22■□□□□ 0.83
SCN4B-205ENST00000531550 DNM2P50570 870 aa20.22■□□□□ 0.83
SCN4B-205ENST00000531550 BICD2Q8TD16 824 aa20.22■□□□□ 0.83
SCN4B-205ENST00000531550 ZSCAN31Q96LW9 406 aaPredicted RBP20.22■□□□□ 0.83
SCN4B-205ENST00000531550 SH2D3AQ9BRG2 576 aa20.22■□□□□ 0.83
SCN4B-205ENST00000531550 INO80BQ9C086 356 aaPredicted RBP20.22■□□□□ 0.83
SCN4B-205ENST00000531550 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms