RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 KCTD17Q8N5Z5 321 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 PLVAPQ9BX97 442 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 TMEM117Q9H0C3 514 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 RNF19AQ9NV58 838 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 ERLIN2O94905 339 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 ATF7P17544 494 aaPredicted RBP16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 HOXA11P31270 313 aaPredicted RBP16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 RAB27AP51159 221 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 MBTD1Q05BQ5 628 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 FAM173BQ6P4H8 233 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 CASD1Q96PB1 797 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 PLXNA4Q9HCM2 1894 aa16.56■□□□□ 0.24
PPFIA1-216ENST00000530746 XIRP2A4UGR9 3374 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 LRRIQ4A6NIV6 560 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 TSPAN1O60635 241 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 ZNF623O75123 536 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 AXLP30530 894 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 PTPAQ15257 358 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 PTPROQ16827 1216 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 CLLU1OSQ5K130 101 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 KCNK18Q7Z418 384 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 P2RX5Q93086 422 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 MRPL38Q96DV4 380 aaKnown RBP16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
PPFIA1-216ENST00000530746 MYO7AQ13402 2215 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 SLC26A4O43511 780 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 LONP1P36776 959 aaKnown RBP16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 UBA7P41226 1012 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 NAMPTP43490 491 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 PPP2R5AQ15172 486 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 AMHR2Q16671 573 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 NOTUMQ6P988 496 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 CABP7Q86V35 215 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 KIFAP3Q92845 792 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 CDK5RAP3Q96JB5 506 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 AAASQ9NRG9 546 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 PCDHB2Q9Y5E7 798 aa16.54■□□□□ 0.24
PPFIA1-216ENST00000530746 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 GRIN1Q05586 938 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 TMEM119Q4V9L6 283 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 UBXN11Q5T124 520 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 RINT1Q6NUQ1 792 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 LRRC55Q6ZSA7 311 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 C1orf186Q6ZWK4 172 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 ZBTB8OSQ8IWT0 167 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 LRRC43Q8N309 656 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 LPPQ93052 612 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 CPB2Q96IY4 423 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 IFT74Q96LB3 600 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PLIN2Q99541 437 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 LMAN2LQ9H0V9 348 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 C2orf40Q9H1Z8 148 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 CWH43Q9H720 699 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PRDM6Q9NQX0 595 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PRMT7Q9NVM4 692 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 HCSTQ9UBK5 93 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 SPTBN5Q9NRC6 3674 aaKnown RBP16.53■□□□□ 0.24
PPFIA1-216ENST00000530746 GRM6O15303 877 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 ITGB1P05556 798 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 LONRF3Q496Y0 759 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 MRPL10Q7Z7H8 261 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 KLHL23Q8NBE8 558 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 USP28Q96RU2 1077 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 RUSC1Q9BVN2 902 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 FZD8Q9H461 694 aa16.52■□□□□ 0.24
PPFIA1-216ENST00000530746 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms