RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 C1orf53Q5VUE5 145 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 KLHL10Q6JEL2 608 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 ANKRD33Q7Z3H0 272 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 ZNF710Q8N1W2 664 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 TMEM161BQ8NDZ6 487 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 FIZ1Q96SL8 496 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 INO80BQ9C086 356 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-216ENST00000530426 ADAMTS10Q9H324 1103 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
LTBP3-216ENST00000530426 ABCD1P33897 745 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 PPP1R2P41236 205 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 EFNA5P52803 228 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 CRYBB1P53674 252 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-216ENST00000530426 PTENP60484 403 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 POU5F1BQ06416 359 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 BICD1Q96G01 975 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 TOX2Q96NM4 488 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 ACCSQ96QU6 501 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 TMEM134Q9H6X4 195 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 ARHGAP28Q9P2N2 729 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 TBX20Q9UMR3 447 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 EXOC7Q9UPT5 735 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 PHLPP2Q6ZVD8 1323 aa16.89■□□□□ 0.29
LTBP3-216ENST00000530426 PSMA7O14818 248 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CAND2O75155 1236 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 PRKCBP05771 671 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CKBP12277 381 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 GTF2BQ00403 316 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 MAPK6Q16659 721 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 TRIM71Q2Q1W2 868 aaKnown RBP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 ANO6Q4KMQ2 910 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CDCA2Q69YH5 1023 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 ZNF507Q8TCN5 953 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 DNAJC25Q9H1X3 360 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 TSPY26PQ9H489 355 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 ST6GALNAC4Q9H4F1 302 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 TMEM206Q9H813 350 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 PRDM5Q9NQX1 630 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-216ENST00000530426 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 CTNND2Q9UQB3 1225 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 UBE4BO95155 1302 aa16.88■□□□□ 0.29
LTBP3-216ENST00000530426 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 ERLIN2O94905 339 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 CHRNA1P02708 482 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 CLTBP09497 229 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 DARSP14868 501 aaKnown RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 SCP2P22307 547 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 FGFR4P22455 802 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 MBTD1Q05BQ5 628 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 MGAT3Q09327 533 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 EPM2AIP1Q7L775 607 aaPredicted RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 ADSSL1Q8N142 457 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 NELFBQ8WX92 580 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 NFKBIZQ9BYH8 718 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 PPP1R12CQ9BZL4 782 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
LTBP3-216ENST00000530426 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
LTBP3-216ENST00000530426 PPP1R37O75864 691 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 SELPP16109 830 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 SFPQP23246 707 aaKnown RBP eCLIP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 EIF4BP23588 611 aaKnown RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 STX17P56962 302 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 ZNF445P59923 1031 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 NCBP1Q09161 790 aaKnown RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 KCNA1Q09470 495 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 KNOP1Q1ED39 458 aaKnown RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 FAM26DQ5JW98 314 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 C11orf57Q6ZUT1 292 aaPredicted RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 LRRC8DQ7L1W4 858 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 UBE2Q1Q7Z7E8 422 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
LTBP3-216ENST00000530426 TSG101Q99816 390 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 STRA6Q9BX79 667 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 MINDY3Q9H8M7 445 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 USP20Q9Y2K6 914 aa16.86■□□□□ 0.29
LTBP3-216ENST00000530426 CALUO43852 315 aaPredicted RBP16.85■□□□□ 0.29
LTBP3-216ENST00000530426 RPS6KA5O75582 802 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 GHRP10912 638 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 MATR3P43243 847 aaKnown RBP eCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms