RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PRKCSHP14314 528 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 GSDMDP57764 484 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 PTPN11Q06124 597 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 KCNA1Q09470 495 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 SPECC1LQ69YQ0 1117 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 SEZ6LQ9BYH1 1024 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 UBE4BO95155 1302 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 MBLAC1A4D2B0 266 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 CALUO43852 315 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 MAFO75444 373 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 C22orf31O95567 290 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 GNAT1P11488 350 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 KLRC1P26715 233 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 RFC5P40937 340 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 POLGP54098 1239 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 EDRF1Q3B7T1 1238 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 GDF6Q6KF10 455 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 MTHFD1LQ6UB35 978 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 SLC7A3Q8WY07 619 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 TUBGCP2Q9BSJ2 902 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 C11orf49Q9H6J7 331 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 PDLIM7Q9NR12 457 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 TYW1Q9NV66 732 aaKnown RBP15.82■□□□□ 0.12
TTC39A-216ENST00000530004 TRAF3IP3Q9Y228 551 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 IGKV6-21A0A0C4DH24 114 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 LGALS16A8MUM7 142 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 K7ENM7 598 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
TTC39A-216ENST00000530004 PDXKO00764 312 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 MAGEB2O15479 319 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 TPM2P07951 284 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
TTC39A-216ENST00000530004 CDK7P50613 346 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 PEX3P56589 373 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ZNF200P98182 395 aaPredicted RBP15.81■□□□□ 0.12
TTC39A-216ENST00000530004 LRMPQ12912 555 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 NECAB2Q7Z6G3 386 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 KSR1Q8IVT5 923 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ZC3H3Q8IXZ2 948 aaKnown RBP15.81■□□□□ 0.12
TTC39A-216ENST00000530004 EXOC8Q8IYI6 725 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 MCPH1Q8NEM0 835 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 CACTINQ8WUQ7 758 aaKnown RBP15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ZBTB10Q96DT7 871 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 CEP63Q96MT8 703 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ATP6V0A4Q9HBG4 840 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 XPNPEP1Q9NQW7 623 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ARID2Q68CP9 1835 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 ZMYM2Q9UBW7 1377 aa15.81■□□□□ 0.12
TTC39A-216ENST00000530004 TREHO43280 583 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 PPP1R37O75864 691 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 PBX1P40424 430 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
TTC39A-216ENST00000530004 UBXN1Q04323 297 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 EMC2Q15006 297 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 SLC39A5Q6ZMH5 540 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 UBE2Q1Q7Z7E8 422 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 TNS4Q8IZW8 715 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 KIFAP3Q92845 792 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 JPH2Q9BR39 696 aaPredicted RBP15.8■□□□□ 0.12
TTC39A-216ENST00000530004 STRA6Q9BX79 667 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 CETN3O15182 167 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 TGFB1I1O43294 461 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 NR2F2P24468 414 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 SOX10P56693 466 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 ADAM9Q13443 819 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 ALCAMQ13740 583 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 SNX17Q15036 470 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 EFCAB12Q6NXP0 572 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 LRRC71Q8N4P6 559 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 RETREG2Q8NC44 543 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 NOC4LQ9BVI4 516 aaKnown RBP15.8■□□□□ 0.12
TTC39A-216ENST00000530004 SUGCTQ9HAC7 445 aa15.8■□□□□ 0.12
TTC39A-216ENST00000530004 MYH11P35749 1972 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 GAS2O43903 313 aaKnown RBP15.79■□□□□ 0.12
TTC39A-216ENST00000530004 GNA14O95837 355 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 NCKAP1LP55160 1127 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 TBX2Q13207 712 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-216ENST00000530004 DMP1Q13316 513 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-216ENST00000530004 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-216ENST00000530004 PTGISQ16647 500 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 CCDC40Q4G0X9 1142 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 ARMCX5Q6P1M9 558 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 LINC01465Q8N7H1 131 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 IKZF4Q9H2S9 585 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 C17orf75Q9HAS0 396 aa15.79■□□□□ 0.12
TTC39A-216ENST00000530004 TRMT13Q9NUP7 481 aaKnown RBP15.79■□□□□ 0.12
TTC39A-216ENST00000530004 SMIM35A0A1B0GVV1 85 aa15.78■□□□□ 0.12
TTC39A-216ENST00000530004 CCDC85CA6NKD9 419 aa15.78■□□□□ 0.12
TTC39A-216ENST00000530004 CCDC169A6NNP5 214 aa15.78■□□□□ 0.12
TTC39A-216ENST00000530004 CLIC2O15247 247 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms