RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 SAMD15Q9P1V8 674 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 MAGEC2Q9UBF1 373 aaPredicted RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 NUDT5Q9UKK9 219 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 ABT1Q9ULW3 272 aaKnown RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 PLAAQ9Y263 795 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 RRP7AQ9Y3A4 280 aaKnown RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 RIC1Q4ADV7 1423 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 CASP8AP2Q9UKL3 1982 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 M0R2C6 588 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 HGSO14964 777 aaPredicted RBP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 AMY2AP04746 511 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 APPP05067 770 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 AMY2BP19961 511 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 GPTP24298 496 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 YBX1P67809 324 aaKnown RBP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 PCBP1Q15365 356 aaKnown RBP eCLIP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 PARP10Q53GL7 1025 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 ZCCHC8Q6NZY4 707 aaKnown RBP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 TTLL7Q6ZT98 887 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 PPP1R42Q7Z4L9 355 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 PTRH1Q86Y79 214 aaKnown RBP6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 CNTROBQ8N137 903 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 UBR7Q8N806 425 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 SH3RF2Q8TEC5 729 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 SEC14L1Q92503 715 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 CRAMP1Q96RY5 1269 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 SLC6A20Q9NP91 592 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 UBN2Q6ZU65 1347 aa6.51□□□□□ -1.37
AMBRA1-209ENST00000529963 WNT9AO14904 365 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SLC6A11P48066 632 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 CRY1Q16526 586 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 CFAP100Q494V2 611 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 FAM47CQ5HY64 1035 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 CDCA2Q69YH5 1023 aaPredicted RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 ARHGAP36Q6ZRI8 547 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 C16orf59Q7L2K0 433 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 ZNF34Q8IZ26 560 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 ARRDC4Q8NCT1 418 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 PLEKHF1Q96S99 279 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 THUMPD2Q9BTF0 503 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 TSPYL4Q9UJ04 414 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 DSEQ9UL01 958 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 TELO2Q9Y4R8 837 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 PCDHB4Q9Y5E5 795 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SNED1Q8TER0 1413 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 KDM3BQ7LBC6 1761 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 A0A087X0B3 334 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 KRIT1O00522 736 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 PPIP5K2O43314 1243 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 PDE8AO60658 829 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 TADA3O75528 432 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 NTSR2O95665 410 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 MAP2K2P36507 400 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 MC3RP41968 323 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 MASP1P48740 699 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 GRIN1Q05586 938 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 HABP4Q5JVS0 413 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 OVCH1Q7RTY7 1134 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SUPT20HQ8NEM7 779 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 ALG3Q92685 438 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 UTP14AQ9BVJ6 771 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 CELF4Q9BZC1 486 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 VPS33BQ9H267 617 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SMURF1Q9HCE7 757 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 INTS7Q9NVH2 962 aaKnown RBP6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 SIRT5Q9NXA8 310 aa6.5□□□□□ -1.37
AMBRA1-209ENST00000529963 THSD7BQ9C0I4 1608 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 TCRBV5S2A0A599 114 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 TCERG1O14776 1098 aaKnown RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 EIF2S2P20042 333 aaKnown RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 PMLP29590 882 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 EPHB3P54753 998 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 SOX10P56693 466 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 LMOD3Q0VAK6 560 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 GPR19Q15760 415 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 USP50Q70EL3 339 aaPredicted RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 CLEC4DQ8WXI8 215 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 WNK4Q96J92 1243 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 CAPNS2Q96L46 248 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 GPR101Q96P66 508 aaPredicted RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 CNTD2Q9H8S5 307 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 DDX21Q9NR30 783 aaKnown RBP eCLIP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 BABAM1Q9NWV8 329 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 MBD1Q9UIS9 605 aaPredicted RBP6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 ATP6V0A2Q9Y487 856 aa6.49□□□□□ -1.37
AMBRA1-209ENST00000529963 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms