RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SPECC1Q5M775 1068 aa17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 CMTR2Q8IYT2 770 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 CLP1Q92989 425 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 DACT1Q9NYF0 836 aa17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 PIN4Q9Y237 131 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-218ENST00000529566 TSPAN1O60635 241 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 BRD1O95696 1058 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 PLA2G4BP0C869 781 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 FGFR1P11362 822 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 ARSHQ5FYA8 562 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 UBXN11Q5T124 520 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 FIBCD1Q8N539 461 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 KIFAP3Q92845 792 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 LRFN2Q9ULH4 789 aa17.86■□□□□ 0.45
TSPAN4-218ENST00000529566 INO80B-WBP1J3KQ70 363 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 ZNF623O75123 536 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 HIP1RO75146 1068 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 EOMESO95936 686 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 FOSL2P15408 326 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 PLCG1P19174 1290 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 POU3F3P20264 500 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 GUCY2CP25092 1073 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 NAMPTP43490 491 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 BTG3Q14201 252 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 EPC2Q52LR7 807 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 TMEM192Q8IY95 271 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 KRI1Q8N9T8 703 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 SYMPKQ92797 1274 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 CDK5RAP3Q96JB5 506 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 CASD1Q96PB1 797 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 FZD8Q9H461 694 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-218ENST00000529566 MYH15Q9Y2K3 1946 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 LRRIQ4A6NIV6 560 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 SPTLC2O15270 562 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 PPP6R2O75170 966 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 YEATS4O95619 227 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 AXLP30530 894 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 BMPR1AP36894 532 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 STK38Q15208 465 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 FAM187BQ17R55 369 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 CLLU1OSQ5K130 101 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 TWF2Q6IBS0 349 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 MRPL10Q7Z7H8 261 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 SAMD11Q96NU1 681 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 FAM105AQ9NUU6 356 aa17.84■□□□□ 0.45
TSPAN4-218ENST00000529566 PRUNE2Q8WUY3 3088 aa17.83■□□□□ 0.45
TSPAN4-218ENST00000529566 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 C5orf67F2Z3F1 127 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 B4GALT5O43286 388 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 ARF4P18085 180 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 BECN1Q14457 450 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 PPP2R5AQ15172 486 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 FOXD4L6Q3SYB3 417 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 PAN2Q504Q3 1202 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 ATL3Q6DD88 541 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 FOXD4L3Q6VB84 417 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 LRRC55Q6ZSA7 311 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 RAD54LQ92698 747 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 KIFC3Q9BVG8 833 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 TIPINQ9BVW5 301 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 TMEM117Q9H0C3 514 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 KCND2Q9NZV8 630 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 PCDHB2Q9Y5E7 798 aa17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 FNDC1Q4ZHG4 1894 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-218ENST00000529566 A0A087X0B3 334 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 NPHP3-ACAD11A0A0J9YXS1 232 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 TBKBP1A7MCY6 615 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 MEIS3P2A8K0S8 358 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 ERLIN2O94905 339 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 EDN1P05305 212 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 SSBP05455 408 aaKnown RBP eCLIP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 DDIT3P35638 169 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 NPTX2P47972 431 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 RAB27AP51159 221 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 DNM1Q05193 864 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 MCM6Q14566 821 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 AXDND1Q5T1B0 1012 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 SMG8Q8ND04 991 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 FBXO22Q8NEZ5 403 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 LPPQ93052 612 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 NTPCRQ9BSD7 190 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 EIF2AQ9BY44 585 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms