RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 SCFD2Q8WU76 684 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 RABEP2Q9H5N1 569 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 DDX3XO00571 662 aaKnown RBP eCLIP17.15■□□□□ 0.344e-16■■■■■ 29.4
TM9SF1-208ENST00000529332 NFIBO00712 420 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 SNRNP48Q6IEG0 339 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 OLIG1Q8TAK6 271 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 PBKQ96KB5 322 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
TM9SF1-208ENST00000529332 ZBTB39O15060 712 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 CEP104O60308 925 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 NMT1P30419 496 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 CCT5P48643 541 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 ACTRT1Q8TDG2 376 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 MAF1Q9H063 256 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 CLSTN1O94985 981 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 ECHS1P30084 290 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 IFI16Q16666 785 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 C2orf69Q8N8R5 385 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 WHAMMQ8TF30 809 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 GBA2Q9HCG7 927 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 ZNF214Q9UL59 606 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
TM9SF1-208ENST00000529332 GTPBP10A4D1E9 387 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 GFPT2O94808 682 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 SLITRK3O94933 977 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 ANXA13P27216 316 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 KSR1Q8IVT5 923 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 CD302Q8IX05 232 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 BCAS4Q8TDM0 211 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 STXBP5LQ9Y2K9 1186 aa17.13■□□□□ 0.33
TM9SF1-208ENST00000529332 ATP8B3O60423 1300 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 GAP43P17677 238 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 MAGEA9P43362 315 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 PDCLQ13371 301 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 FAM186BQ8IYM0 893 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 MYCT1Q8N699 235 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 DYDC2Q96IM9 177 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 ISCUQ9H1K1 167 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 NOC2LQ9Y3T9 749 aaKnown RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 EIF3DO15371 548 aaKnown RBP eCLIP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 CHMP2AO43633 222 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 FAM13AO94988 1023 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 HSPA9P38646 679 aaKnown RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 ATP1A2P50993 1020 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 PLS1Q14651 629 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 KCTD19Q17RG1 926 aaPredicted RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
TM9SF1-208ENST00000529332 A0A0A6YYK5 440 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 EVI5O60447 810 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 PSMD10O75832 226 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 SLC30A5Q8TAD4 765 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 TUFT1Q9NNX1 390 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 PGRMC1O00264 195 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 FERP16591 822 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 OSBPP22059 807 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 PSMC2P35998 433 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 GALCP54803 685 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 RPS6P62753 249 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 SETQ01105 290 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 NFIL3Q16649 462 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 LRCH2Q5VUJ6 765 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms