RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GTPBP4Q9BZE4 634 aaKnown RBP6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 PRO3102Q9H379 93 aa6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 RGL1Q9NZL6 768 aa6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 INPP5FQ9Y2H2 1132 aa6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 CEP83Q9Y592 693 aa6.99□□□□□ -1.29
ATPAF1-209ENST00000529214 LYPLA2O95372 231 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CKBP12277 381 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CCL23P55773 120 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ATP2C1P98194 919 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 GPNMBQ14956 572 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TARBP2Q15633 366 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 IL17AQ16552 155 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PLEKHG6Q3KR16 790 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ARL6IP4Q66PJ3 421 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TAF2Q6P1X5 1199 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 FAM173BQ6P4H8 233 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TRAF7Q6Q0C0 670 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 MTHFD1LQ6UB35 978 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 DTHD1Q6ZMT9 781 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ANO5Q75V66 913 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 C16orf59Q7L2K0 433 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TRMT1LQ7Z2T5 733 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 FILIP1Q7Z7B0 1213 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CCDC155Q8N6L0 562 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 IGSF22Q8N9C0 903 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SNRNP27Q8WVK2 155 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TRAPPC12Q8WVT3 735 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 DYDC2Q96IM9 177 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 WNT8AQ9H1J5 351 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PCDH12Q9NPG4 1184 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 WRAP73Q9P2S5 460 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TUBE1Q9UJT0 475 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CEP131Q9UPN4 1083 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PCDHA2Q9Y5H9 948 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 COL1A2P08123 1366 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SMIM35A0A1B0GVV1 85 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ZBTB39O15060 712 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 MAGEB2O15479 319 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CAND2O75155 1236 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 BMP15O95972 392 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 RPLP2P05387 115 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ZSCAN22P10073 491 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 XRCC6P12956 609 aaKnown RBP eCLIP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CSF2RAP15509 400 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SELPP16109 830 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 RPA1P27694 616 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 THPOP40225 353 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 EPHB4P54760 987 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PRKCEQ02156 737 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CYP4A11Q02928 519 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 FPGSQ05932 587 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PSMD2Q13200 908 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PKP1Q13835 747 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CTTNQ14247 550 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TMEM266Q2M3C6 531 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ZNF618Q5T7W0 954 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 OTUD6AQ7L8S5 288 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CATSPER3Q86XQ3 398 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TPH2Q8IWU9 490 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 KIAA0319LQ8IZA0 1049 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SIX5Q8N196 739 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 NEK9Q8TD19 979 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 DNAJB3Q8WWF6 145 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 PMM1Q92871 262 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ZDHHC16Q969W1 377 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 ZBTB10Q96DT7 871 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 MRFAP1L1Q96HT8 127 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SCLYQ96I15 445 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CEP89Q96ST8 783 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 LXNQ9BS40 222 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 POLR3CQ9BUI4 534 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 UBE2OQ9C0C9 1292 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 TUFT1Q9NNX1 390 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 LRWD1Q9UFC0 647 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 CLIC4Q9Y696 253 aa6.98□□□□□ -1.29
ATPAF1-209ENST00000529214 IGKV6-21A0A0C4DH24 114 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 TMEM150BA6NC51 233 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 RSPH10B2B2RC85 870 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 MAFO75444 373 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 MED24O75448 989 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 C22orf31O95567 290 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 F13A1P00488 732 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 CHRNA1P02708 482 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 RSPH10BP0C881 870 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 MUTP22033 750 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 YWHABP31946 246 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 RFC2P35250 354 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 SEC13P55735 322 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 DAB2P98082 770 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 PPIGQ13427 754 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 PTPAQ15257 358 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms