RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CHADLQ6NUI6 762 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 SLFN12Q8IYM2 578 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 HEMGNQ9BXL5 484 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 SCN11AQ9UI33 1791 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 F5H6K3 240 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 POC1B-GALNT4F8VUJ3 575 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 KRT16P08779 473 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 KLRC3Q07444 240 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 ITIH4Q14624 930 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 GJB7Q6PEY0 223 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 NLRX1Q86UT6 975 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■□□□□ 9.7
LTBP3-210ENST00000528516 STMN4Q9H169 189 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-210ENST00000528516 SSU72P8A0A1W2PR75 194 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 TCRBV5S4A2TA0A5A2 114 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 IFI35P80217 286 aaPredicted RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 MYL7Q01449 175 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 NAALADL2Q58DX5 795 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 TAOK1Q7L7X3 1001 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 TMOD4Q9NZQ9 345 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 KLHL14Q9P2G3 628 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 DAAM1Q9Y4D1 1078 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 PJA2O43164 708 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 SLC37A4O43826 429 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 KLRC4O43908 158 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 SEC23AQ15436 765 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 NAP1L3Q99457 506 aaPredicted RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 BBOX1O75936 387 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 RPS6KA3P51812 740 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 LAMB3Q13751 1172 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 CDCA2Q69YH5 1023 aaPredicted RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 SYCE1Q8N0S2 351 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 CHURC1Q8WUH1 139 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 RAD54LQ92698 747 aa19.2■□□□□ 0.66
LTBP3-210ENST00000528516 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 USP15Q9Y4E8 981 aaPredicted RBP19.2■□□□□ 0.66
LTBP3-210ENST00000528516 ZBTB5O15062 677 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 COPS2P61201 443 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF653Q96CK0 615 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 HAUS1Q96CS2 278 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 SEMA6BQ9H3T3 888 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 QTRT2Q9H974 415 aaKnown RBP19.19■□□□□ 0.66
LTBP3-210ENST00000528516 SIK3Q9Y2K2 1263 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 PMS2P54278 862 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 PEX3P56589 373 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF408Q9H9D4 720 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 FERP16591 822 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 NCALDP61601 193 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 DYNLT1P63172 113 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 RIPK1Q13546 671 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 GRIK5Q16478 980 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 SLC18A3Q16572 532 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 METTL13Q8N6R0 699 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 NEDD1Q8NHV4 660 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 KIFAP3Q92845 792 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 ELMO3Q96BJ8 720 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 VCXQ9H320 206 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 DNAJC12Q9UKB3 198 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 AFF2P51816 1311 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 MYH13Q9UKX3 1938 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 BLMHQ13867 455 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 SETDB1Q15047 1291 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 PDCD2Q16342 344 aaPredicted RBP19.19■□□□□ 0.66
LTBP3-210ENST00000528516 ZC2HC1CQ53FD0 456 aaPredicted RBP19.19■□□□□ 0.66
LTBP3-210ENST00000528516 TMEM154Q6P9G4 183 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 GLG1Q92896 1179 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 GLT8D2Q9H1C3 349 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 PNMA3Q9UL41 463 aa19.19■□□□□ 0.66
LTBP3-210ENST00000528516 H0YGN5 161 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 CCDC188H7C350 402 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 ASAP2O43150 1006 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 MYL1P05976 194 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 FGFR2P21802 821 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 PSMC2P35998 433 aaKnown RBP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 LRRC63Q05C16 580 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 LMBRD2Q68DH5 695 aaPredicted RBP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 RAB3IPQ96QF0 476 aaPredicted RBP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 SLC5A4Q9NY91 659 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 NFS1Q9Y697 457 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 ARHGEF16Q5VV41 709 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 PASD1Q8IV76 773 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 DLGAP2Q9P1A6 1054 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 DPPA5A6NC42 116 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 RASGRF2O14827 1237 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 LGR5O75473 907 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 SLC29A2Q14542 456 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 GLIS3Q8NEA6 775 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 L3MBTL3Q96JM7 780 aaPredicted RBP19.18■□□□□ 0.66
LTBP3-210ENST00000528516 PI4KBQ9UBF8 816 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 SLC12A4Q9UP95 1085 aa19.18■□□□□ 0.66
LTBP3-210ENST00000528516 ATP2A1O14983 1001 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 NR3C1P04150 777 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 DR1Q01658 176 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 STRN3Q13033 797 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms