RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 FAM193BQ96PV7 902 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ASB2Q96Q27 587 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 UHRF1Q96T88 793 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 APOL6Q9BWW8 343 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM117Q9H0C3 514 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 GBP3Q9H0R5 595 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 POLR3FQ9H1D9 316 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 TUFT1Q9NNX1 390 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ENTPD7Q9NQZ7 604 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 WRAP73Q9P2S5 460 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 PUF60Q9UHX1 559 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 TCF20Q9UGU0 1960 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 C9IYK1 514 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ZBTB39O15060 712 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 GRM6O15303 877 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ASAP2O43150 1006 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 SLITRK3O94933 977 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 NDUFV1P49821 464 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 RAB27AP51159 221 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 DTHD1Q6ZMT9 781 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 FAM43BQ6ZT52 329 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 FERMT3Q86UX7 667 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 HACE1Q8IYU2 909 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ELAC1Q9H777 363 aaKnown RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 UBE2ZQ9H832 354 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 CHST12Q9NRB3 414 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 ANKEF1Q9NU02 776 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 TYW1Q9NV66 732 aaKnown RBP10.09□□□□□ -0.79
CMTM1-210ENST00000528441 LRWD1Q9UFC0 647 aa10.09□□□□□ -0.79
CMTM1-210ENST00000528441 IGKV6-21A0A0C4DH24 114 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 ZC3H11AO75152 810 aaKnown RBP eCLIP10.08□□□□□ -0.8
CMTM1-210ENST00000528441 MED24O75448 989 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 STBD1O95210 358 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 POU3F3P20264 500 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-210ENST00000528441 SSTR3P32745 418 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-210ENST00000528441 RARRES1P49788 294 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 KCNQ1P51787 676 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 KRT17Q04695 432 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 PTGDRQ13258 359 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 CLUL1Q15846 466 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 RILPL1Q5EBL4 403 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 PLPP4Q5VZY2 271 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
CMTM1-210ENST00000528441 COLGALT1Q8NBJ5 622 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 LPPQ93052 612 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 TMEM169Q96HH4 297 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 IFT74Q96LB3 600 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 FAM105AQ9NUU6 356 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 FAM50BQ9Y247 325 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-210ENST00000528441 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
CMTM1-210ENST00000528441 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 H3BQ06 376 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 FGF18O76093 207 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 EOMESO95936 686 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 ITGB1P05556 798 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 SRGAP2BP0DMP2 458 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 ITGA4P13612 1032 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 PPM1AP35813 382 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 PBX3P40426 434 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 ALDH7A1P49419 539 aaKnown RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 DSC3Q14574 896 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 NOTUMQ6P988 496 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 TMC7Q7Z402 723 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 CATSPER3Q86XQ3 398 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 P2RX5Q93086 422 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 CPB2Q96IY4 423 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 AGPAT5Q9NUQ2 364 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 DDX19AQ9NUU7 478 aaKnown RBP10.07□□□□□ -0.8
CMTM1-210ENST00000528441 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 PLAGL2Q9UPG8 496 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 KIAA1024Q9UPX6 916 aa10.07□□□□□ -0.8
CMTM1-210ENST00000528441 PCDHB6Q9Y5E3 794 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms