RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 LXNQ9BS40 222 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 C2orf71A6NGG8 1288 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 ZNF623O75123 536 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 NEFLP07196 543 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 POLGP54098 1239 aaPredicted RBP28.93■■■□□ 2.22
TRIM3-206ENST00000528227 LONRF3Q496Y0 759 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 WASF1Q92558 559 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 AGPAT5Q9NUQ2 364 aa28.93■■■□□ 2.22
TRIM3-206ENST00000528227 FAM205CA6NFA0 338 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 MEIS3P2A8K0S8 358 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 MARCH6O60337 910 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 ZC3H11AO75152 810 aaKnown RBP eCLIP28.92■■■□□ 2.22
TRIM3-206ENST00000528227 FDPSP14324 419 aaKnown RBP28.92■■■□□ 2.22
TRIM3-206ENST00000528227 HOXB8P17481 243 aaPredicted RBP28.92■■■□□ 2.22
TRIM3-206ENST00000528227 YWHABP31946 246 aaKnown RBP28.92■■■□□ 2.22
TRIM3-206ENST00000528227 RFC5P40937 340 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 SPIRE1Q08AE8 756 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 NCAPH2Q6IBW4 605 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 GLB1LQ6UWU2 654 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 PRPF31Q8WWY3 499 aaKnown RBP28.92■■■□□ 2.22
TRIM3-206ENST00000528227 TMEM169Q96HH4 297 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 TBC1D13Q9NVG8 400 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 RGL1Q9NZL6 768 aa28.92■■■□□ 2.22
TRIM3-206ENST00000528227 NR5A1Q13285 461 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 NOMO2Q5JPE7 1267 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 TMEM173Q86WV6 379 aaPredicted RBP28.91■■■□□ 2.22
TRIM3-206ENST00000528227 SLFN12Q8IYM2 578 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 PSPC1Q8WXF1 523 aaKnown RBP28.91■■■□□ 2.22
TRIM3-206ENST00000528227 CASP10Q92851 521 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 TNFRSF25Q93038 417 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 TMEM143Q96AN5 459 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 APOL5Q9BWW9 433 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 HCFC2Q9Y5Z7 792 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 ARID2Q68CP9 1835 aa28.91■■■□□ 2.22
TRIM3-206ENST00000528227 CARNS1A5YM72 827 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 OFD1O75665 1012 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 KRT2P35908 639 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 LAMTOR4Q0VGL1 99 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 SRGAP1Q7Z6B7 1085 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 NECAB1Q8N987 351 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 DYDC2Q96IM9 177 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 MFSD14AQ96MC6 490 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 KCNH6Q9H252 994 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 NRDE2Q9H7Z3 1164 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 MINDY3Q9H8M7 445 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 BMP2KQ9NSY1 1161 aaPredicted RBP28.9■■■□□ 2.22
TRIM3-206ENST00000528227 INPP5FQ9Y2H2 1132 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 PCDHB2Q9Y5E7 798 aa28.9■■■□□ 2.22
TRIM3-206ENST00000528227 TECTAO75443 2155 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 GAS2O43903 313 aaKnown RBP28.89■■■□□ 2.22
TRIM3-206ENST00000528227 CLASP2O75122 1294 aaKnown RBP28.89■■■□□ 2.22
TRIM3-206ENST00000528227 BAG4O95429 457 aaKnown RBP28.89■■■□□ 2.22
TRIM3-206ENST00000528227 SRGAP2CP0DJJ0 459 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 ZXDAP98168 799 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 TRIM67Q6ZTA4 783 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 OTUD6AQ7L8S5 288 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 VPS52Q8N1B4 723 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 PGBD4Q96DM1 585 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 ZBP1Q9H171 429 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 ZSWIM4Q9H7M6 989 aa28.89■■■□□ 2.22
TRIM3-206ENST00000528227 LARGE1O95461 756 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 CXCL14O95715 111 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 GALTP07902 379 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 CTTNQ14247 550 aaKnown RBP28.88■■■□□ 2.21
TRIM3-206ENST00000528227 BMS1Q14692 1282 aaKnown RBP28.88■■■□□ 2.21
TRIM3-206ENST00000528227 EMC2Q15006 297 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 ME3Q16798 604 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 BMP8AQ7Z5Y6 402 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 DDX53Q86TM3 631 aaKnown RBP28.88■■■□□ 2.21
TRIM3-206ENST00000528227 BCL7CQ8WUZ0 217 aaPredicted RBP28.88■■■□□ 2.21
TRIM3-206ENST00000528227 TCP11Q8WWU5 503 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 GTF3C6Q969F1 213 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 IGSF21Q96ID5 467 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 BRMS1Q9HCU9 246 aa28.88■■■□□ 2.21
TRIM3-206ENST00000528227 TRIOO75962 3097 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 ZBTB39O15060 712 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 HOXA11P31270 313 aaPredicted RBP28.87■■■□□ 2.21
TRIM3-206ENST00000528227 CA8P35219 290 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 CYP4A11Q02928 519 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 RNASELQ05823 741 aaKnown RBP28.87■■■□□ 2.21
TRIM3-206ENST00000528227 TPRNQ4KMQ1 711 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 XKR9Q5GH70 373 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 AGMOQ6ZNB7 445 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 MRPL10Q7Z7H8 261 aaKnown RBP28.87■■■□□ 2.21
TRIM3-206ENST00000528227 FERMT3Q86UX7 667 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 DNAJB4Q9UDY4 337 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 IRAK3Q9Y616 596 aa28.87■■■□□ 2.21
TRIM3-206ENST00000528227 TMEM221A6NGB7 291 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 M0R296 226 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 SLITRK3O94933 977 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 UBXN11Q5T124 520 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 RNF149Q8NC42 400 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 AUTS2Q8WXX7 1259 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 FBXL18Q96ME1 805 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 CDH22Q9UJ99 828 aa28.86■■■□□ 2.21
TRIM3-206ENST00000528227 MUC6Q6W4X9 2439 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.85■■■□□ 2.21
TRIM3-206ENST00000528227 ASAP2O43150 1006 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 B4GALT3O60512 393 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 CTSAP10619 480 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms