RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PRPF31Q8WWY3 499 aaKnown RBP25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 TMEM143Q96AN5 459 aa25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 TRAIPQ9BWF2 469 aa25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 BMP2KQ9NSY1 1161 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 TBX3O15119 743 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 HOXB8P17481 243 aaPredicted RBP25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 HOXD11P31277 338 aaPredicted RBP25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 KCNC3Q14003 757 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 NOMO2Q5JPE7 1267 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 PSPC1Q8WXF1 523 aaKnown RBP25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 SUSD6Q92537 303 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 HAS1Q92839 578 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 CASP10Q92851 521 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 PGBD4Q96DM1 585 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 GBP3Q9H0R5 595 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 S1PR5Q9H228 398 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 BRMS1Q9HCU9 246 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 RGL1Q9NZL6 768 aa25.03■■□□□ 1.6
TRAPPC4-208ENST00000527680 MUC6Q6W4X9 2439 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 C2orf71A6NGG8 1288 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 YWHABP31946 246 aaKnown RBP25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 RFC5P40937 340 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 RAB27AP51159 221 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 AK2P54819 239 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 TPRNQ4KMQ1 711 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 SYCE2Q6PIF2 218 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 POTEDQ86YR6 584 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 SLFN12Q8IYM2 578 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 VPS52Q8N1B4 723 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 RSPH1Q8WYR4 309 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 PBXIP1Q96AQ6 731 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 LXNQ9BS40 222 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 IFT122Q9HBG6 1241 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 WRAP73Q9P2S5 460 aaPredicted RBP25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 PPME1Q9Y570 386 aa25.02■■□□□ 1.6
TRAPPC4-208ENST00000527680 CARNS1A5YM72 827 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 CTDNEP1O95476 244 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 KRT2P35908 639 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZXDAP98168 799 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 CTTNQ14247 550 aaKnown RBP25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 XKR9Q5GH70 373 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 CES5AQ6NT32 575 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 TRIM67Q6ZTA4 783 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 TPH2Q8IWU9 490 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 C4orf19Q8IY42 314 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 NECAB1Q8N987 351 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 DYDC2Q96IM9 177 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZSWIM4Q9H7M6 989 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 TBC1D13Q9NVG8 400 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 PCDHB2Q9Y5E7 798 aa25.01■■□□□ 1.59
TRAPPC4-208ENST00000527680 TMEM221A6NGB7 291 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 MEIS3P2A8K0S8 358 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 M0R296 226 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZNF623O75123 536 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 OFD1O75665 1012 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 SP100P23497 879 aaPredicted RBP25■■□□□ 1.59
TRAPPC4-208ENST00000527680 ANAPC15P60006 121 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 CYP4A11Q02928 519 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 LAMTOR4Q0VGL1 99 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 EARS2Q5JPH6 523 aaKnown RBP25■■□□□ 1.59
TRAPPC4-208ENST00000527680 SRGAP1Q7Z6B7 1085 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZBTB33Q86T24 672 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 URGCPQ8TCY9 931 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 TCP11Q8WWU5 503 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 DHX33Q9H6R0 707 aaKnown RBP25■■□□□ 1.59
TRAPPC4-208ENST00000527680 NRDE2Q9H7Z3 1164 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 TSHZ2Q9NRE2 1034 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 HCFC2Q9Y5Z7 792 aa25■■□□□ 1.59
TRAPPC4-208ENST00000527680 ASAP2O43150 1006 aa24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 CLASP2O75122 1294 aaKnown RBP24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 NR5A1Q13285 461 aa24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 FBXL18Q96ME1 805 aa24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 FAM193BQ96PV7 902 aaPredicted RBP24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 AGPAT5Q9NUQ2 364 aa24.99■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 FAM205CA6NFA0 338 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZBTB39O15060 712 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 GALTP07902 379 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 EMC2Q15006 297 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 DDX53Q86TM3 631 aaKnown RBP24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 RNF149Q8NC42 400 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 AUTS2Q8WXX7 1259 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 IGSF21Q96ID5 467 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 KCNH6Q9H252 994 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 PCDHA12Q9UN75 941 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 TECTAO75443 2155 aa24.98■■□□□ 1.59
TRAPPC4-208ENST00000527680 GAS2O43903 313 aaKnown RBP24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 GIT2Q14161 759 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 ALYREFQ86V81 257 aaKnown RBP24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 TMEM173Q86WV6 379 aaPredicted RBP24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 MTRQ99707 1265 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 ADAM7Q9H2U9 754 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 MINDY3Q9H8M7 445 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 DNAJB4Q9UDY4 337 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 NR2E1Q9Y466 385 aa24.97■■□□□ 1.59
TRAPPC4-208ENST00000527680 ERLIN2O94905 339 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 ALDH2P05091 517 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 FDPSP14324 419 aaKnown RBP24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 FOSBP53539 338 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 ITIH3Q06033 890 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms