RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 VN1R3Q9BXE9 311 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 MRPL17Q9NRX2 175 aaKnown RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 ARPP21Q9UBL0 812 aaPredicted RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 ST3GAL5Q9UNP4 418 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 SLC4A4Q9Y6R1 1079 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 COL5A1P20908 1838 aaPredicted RBP8.1□□□□□ -1.11
VPS26B-204ENST00000527586 SPAG17Q6Q759 2223 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 TRABD2BA6NFA1 517 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ZC3H11AO75152 810 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS26B-204ENST00000527586 PAPLNO95428 1278 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ADH1AP07327 375 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 FTH1P19P0C7X4 201 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 MYCLP12524 364 aaPredicted RBP8.1□□□□□ -1.11
VPS26B-204ENST00000527586 IL12RB1P42701 662 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 IGBP1P78318 339 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 KRT76Q01546 638 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 USH1GQ495M9 461 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 CLLU1OSQ5K130 101 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
VPS26B-204ENST00000527586 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ZNF710Q8N1W2 664 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 RNF169Q8NCN4 708 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 PHF12Q96QT6 1004 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 ZDHHC7Q9NXF8 308 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 GINS2Q9Y248 185 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 STK24Q9Y6E0 443 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 PIAS3Q9Y6X2 628 aa8.1□□□□□ -1.11
VPS26B-204ENST00000527586 FLNCQ14315 2725 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 MINDY4BA8MYZ0 360 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 DCLK1O15075 740 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 TEX28O15482 410 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 EXTL3O43909 919 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 ECI2O75521 394 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 TGFB3P10600 412 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 CCNE1P24864 410 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 ADSSP30520 456 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 EIF2S3P41091 472 aaKnown RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 AK2P54819 239 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 LMAN2Q12907 356 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 HNRNPDQ14103 355 aaKnown RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 TRIP6Q15654 476 aaKnown RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 BTNL9Q6UXG8 535 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 ITFG1Q8TB96 612 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 HDAC7Q8WUI4 952 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 WBP1Q96G27 269 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 LIN37Q96GY3 246 aaPredicted RBP8.09□□□□□ -1.11
VPS26B-204ENST00000527586 BRD9Q9H8M2 597 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 PXMP2Q9NR77 195 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 TELO2Q9Y4R8 837 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 PLXNB3Q9ULL4 1909 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 MYH4Q9Y623 1939 aa8.09□□□□□ -1.11
VPS26B-204ENST00000527586 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 ATMQ13315 3056 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 BAZ2AQ9UIF9 1905 aaKnown RBP8.08□□□□□ -1.12
VPS26B-204ENST00000527586 GPR182O15218 404 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 GAS2O43903 313 aaKnown RBP8.08□□□□□ -1.12
VPS26B-204ENST00000527586 GALTP07902 379 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 KRT10P13645 584 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 MARK3P27448 753 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 MTX1Q13505 466 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 GRM2Q14416 872 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 SBK1Q52WX2 424 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 ODR4Q5SWX8 454 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 METTL7BQ6UX53 244 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 MARCH9Q86YJ5 346 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 HDDC3Q8N4P3 179 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 MEIS3Q99687 375 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 MRPL9Q9BYD2 267 aaKnown RBP8.08□□□□□ -1.12
VPS26B-204ENST00000527586 PLEKHA4Q9H4M7 779 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 HSPBP1Q9NZL4 362 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
VPS26B-204ENST00000527586 USP9YO00507 2555 aaPredicted RBP8.08□□□□□ -1.12
VPS26B-204ENST00000527586 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 KIAA1217Q5T5P2 1943 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 MGAQ8IWI9 3026 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 A0A1B0GTL3 188 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 ENGP17813 658 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 CR2P20023 1033 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 SP4Q02446 784 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 DSC3Q14574 896 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 TRIM61Q5EBN2 209 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms