RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 CCDC51Q96ER9 411 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 MMTAG2Q9BU76 263 aaKnown RBP18.72■□□□□ 0.59
NR1H3-229ENST00000527464 NT5C3AQ9H0P0 336 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 BHMT2Q9H2M3 363 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 AAASQ9NRG9 546 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 PP2D1A8MPX8 630 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 FGFR1P11362 822 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 GATMP50440 423 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 RESTQ13127 1097 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 CCDC85BQ15834 202 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-229ENST00000527464 CSPP1Q1MSJ5 1256 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 MICALL1Q8N3F8 863 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-229ENST00000527464 FAM105AQ9NUU6 356 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-229ENST00000527464 MTMR6Q9Y217 621 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 NCOR1O75376 2440 aa18.71■□□□□ 0.59
NR1H3-229ENST00000527464 INO80B-WBP1J3KQ70 363 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 STX6O43752 255 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 ATF7P17544 494 aaPredicted RBP18.7■□□□□ 0.58
NR1H3-229ENST00000527464 CDC25AP30304 524 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
NR1H3-229ENST00000527464 MBTD1Q05BQ5 628 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 PPP2R5AQ15172 486 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
NR1H3-229ENST00000527464 CNNM3Q8NE01 707 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 KIFAP3Q92845 792 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 TTC28Q96AY4 2481 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 PGBD4Q96DM1 585 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 CASD1Q96PB1 797 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 C2orf40Q9H1Z8 148 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 GPRC5CQ9NQ84 441 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 RNF19AQ9NV58 838 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 PCDHB12Q9Y5F1 795 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 KIAA1671Q9BY89 1806 aa18.7■□□□□ 0.58
NR1H3-229ENST00000527464 UNC80Q8N2C7 3258 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 LAG3P18627 525 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 NAMPTP43490 491 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 TIGD5Q53EQ6 642 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 CDCA2Q69YH5 1023 aaPredicted RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 NOTUMQ6P988 496 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 ZBTB8OSQ8IWT0 167 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 LRRC43Q8N309 656 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 RNF169Q8NCN4 708 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 MRPL9Q9BYD2 267 aaKnown RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
NR1H3-229ENST00000527464 TYW1Q9NV66 732 aaKnown RBP18.69■□□□□ 0.58
NR1H3-229ENST00000527464 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 LRRIQ4A6NIV6 560 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 E9PMD0 336 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 TSPAN1O60635 241 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 AMHR2Q16671 573 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 CLLU1OSQ5K130 101 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
NR1H3-229ENST00000527464 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 IFT74Q96LB3 600 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 TIPINQ9BVW5 301 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-229ENST00000527464 THEGQ9P2T0 379 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 COG5Q9UP83 839 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 PLAGL2Q9UPG8 496 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
NR1H3-229ENST00000527464 MORC2Q9Y6X9 1032 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-229ENST00000527464 UBA7P41226 1012 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 UBE3AQ05086 875 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 FAM187BQ17R55 369 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 UBXN11Q5T124 520 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 GLB1LQ6UWU2 654 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 CABP7Q86V35 215 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 KLHL23Q8NBE8 558 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 ATXN2LQ8WWM7 1075 aaKnown RBP18.67■□□□□ 0.58
NR1H3-229ENST00000527464 CALML4Q96GE6 196 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 PNMA5Q96PV4 448 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 CSRNP2Q9H175 543 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 CWH43Q9H720 699 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 KCND2Q9NZV8 630 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 REV3LO60673 3130 aa18.67■□□□□ 0.58
NR1H3-229ENST00000527464 GRM6O15303 877 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 ITGB1P05556 798 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
NR1H3-229ENST00000527464 EFNA5P52803 228 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 PTPAQ15257 358 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 SKIV2LQ15477 1246 aaKnown RBP18.66■□□□□ 0.58
NR1H3-229ENST00000527464 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
NR1H3-229ENST00000527464 TMEM119Q4V9L6 283 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 RINT1Q6NUQ1 792 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 C1orf186Q6ZWK4 172 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 KCNK18Q7Z418 384 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 SYT2Q8N9I0 419 aaPredicted RBP18.66■□□□□ 0.58
NR1H3-229ENST00000527464 COLGALT1Q8NBJ5 622 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 DEPTORQ8TB45 409 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 SPPL3Q8TCT6 385 aa18.66■□□□□ 0.58
NR1H3-229ENST00000527464 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms