RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ARHGAP20Q9P2F6 1191 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 TISP43B9A030 160 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 MAPK13O15264 365 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 SCP2P22307 547 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 FMO5P49326 533 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 CLCN6P51797 869 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 TERF2Q15554 542 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 SLC9C1Q4G0N8 1177 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 KLHDC7AQ5VTJ3 777 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 ARMCX2Q7L311 632 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 SPATA33Q96N06 139 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 HAUS4Q9H6D7 363 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 REXO2Q9Y3B8 237 aaKnown RBP17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 WDR81Q562E7 1941 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 A0A0U1RQJ8 604 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 ACTN1P12814 892 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 UCHL3P15374 230 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 CNGA1P29973 690 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 APBA1Q02410 837 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 HSDL1Q3SXM5 330 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 CCDC62Q6P9F0 684 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 ATRIPQ8WXE1 791 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 WDR24Q96S15 920 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 MYO1AQ9UBC5 1043 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 PPME1Q9Y570 386 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
SNRNP35-204ENST00000527158 AKR1B10O60218 316 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 SERPING1P05155 500 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 PLEKP08567 350 aaPredicted RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 EIF4A3P38919 411 aaKnown RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 RAPGEF1Q13905 1077 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 CST9Q5W186 159 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 TMEM143Q96AN5 459 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 MYH9P35579 1960 aaKnown RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 SSU72P8A0A1W2PR75 194 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 TRIM49P0CI25 452 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 TRIM49CP0CI26 452 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 ARHGAP25P42331 645 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 VAMP7P51809 220 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 HUNKP57058 714 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 TARBP2Q15633 366 aaKnown RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 TDRD12Q587J7 1177 aaKnown RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 PLPPR4Q7Z2D5 763 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 BBXQ8WY36 941 aaPredicted RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 PTPN18Q99952 460 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 IRX2Q9BZI1 471 aaPredicted RBP17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF446Q9NWS9 450 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 AIPL1Q9NZN9 384 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 ARHGAP28Q9P2N2 729 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 MYO6Q9UM54 1294 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 MRFAP1Q9Y605 127 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 ARID2Q68CP9 1835 aa17.66■□□□□ 0.42
SNRNP35-204ENST00000527158 KRT86O43790 486 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 LGR5O75473 907 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 KIF11P52732 1056 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 CETN1Q12798 172 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF569Q5MCW4 686 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 DPY19L2P1Q6NXN4 242 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 RABGGTAQ92696 567 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 BICD1Q96G01 975 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 CEP89Q96ST8 783 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 CARD6Q9BX69 1037 aa17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 DIS3Q9Y2L1 958 aaKnown RBP17.65■□□□□ 0.42
SNRNP35-204ENST00000527158 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 ARL2P36404 184 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 NAMPTP43490 491 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 STRN3Q13033 797 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 ASIC2Q16515 512 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 FAM110CQ1W6H9 321 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 CCDC122Q5T0U0 273 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 ZNF467Q7Z7K2 595 aaPredicted RBP17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 DPP9Q86TI2 863 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 EXOC8Q8IYI6 725 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 DEPTORQ8TB45 409 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 JAKMIP2Q96AA8 810 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 VTA1Q9NP79 307 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 PDGFCQ9NRA1 345 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 ADGRA3Q8IWK6 1321 aa17.64■□□□□ 0.42
SNRNP35-204ENST00000527158 HNRNPDLO14979 420 aaKnown RBP17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 ADSSP30520 456 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 SLC26A2P50443 739 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 MYL7Q01449 175 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 CYP27A1Q02318 531 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 CBWD6Q4V339 395 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 CBWD3Q5JTY5 395 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 CBWD5Q5RIA9 395 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 HGSNATQ68CP4 663 aa17.64■□□□□ 0.41
SNRNP35-204ENST00000527158 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms